Protein Alignment Ns3 and AtNug2

DIOPT Version :10

• Sequence 1: NP_569915.1
• Gene: Ns3 / 31097
• FlyBaseID: FBgn0266284
• Length: 606
• Species: Drosophila melanogaster
• Sequence 2: NP_175706.1
• Gene: AtNug2 / 841731
• AraportID: AT1G52980
• Length: 576
• Species: Arabidopsis thaliana
• Alignment Length: 606
• Identity: 151/606 - (24%)
• Similarity: 234/606 - (38%)
• Gaps: 193/606 - (31%)

  Fly     3 KKNKGG-----------APNLGRQLIKDR--FGHTQRRKVDNDTMLH--TTELQDGYDWGRLNLS 52
            |:|.||           .||  .::..||  ||:|   :|.|...|.  ..|||
plant    49 KRNAGGKILSNEYQSKELPN--SRIAPDRRWFGNT---RVVNQKELEYFREELQ----------- 97

  Fly    53 SVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQ-RVGLLS----------KTQEQR------ 100
             ....|::...|:..:|        .:::...|.|| ||.||.          ||:.:|
plant    98 -TKMSSNYNVILKERKL--------PMSLLTDNKKQSRVHLLDMEPFQDAFGRKTKRKRPKLVAS 153

  Fly   101 ----MHQKHDEHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRRDLALLQEDEEILMTPYEK- 160
                :.:|..|.:|..:.......:.|...||          |..|||        :..|.:||
plant   154 DYEALVKKAAESQDAFEEKNGAGPSGEGGEEE----------DGFRDL--------VRHTMFEKG 200

  Fly   161 -NLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRR 224
             :...|.:|::|::.|||:||::|||:|...|...||:.:||....|..::|:||.||:.....:
plant   201 QSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLNKCDLVPAWATK 265

  Fly   225 HWAEYFDSEGIRTAFYSATLVEEELKREAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQ 289
            .|......|....||:::.             ..||.            |.||      |:|:.|
plant   266 GWLRVLSKEYPTLAFHASV-------------NKSFG------------KGSL------LSVLRQ 299

  Fly   290 KYKTIPETQNDELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTI 354
                        ..||..||                          |.::||.||||||||||.|
plant   300 ------------FARLKSDK--------------------------QAISVGFVGYPNVGKSSVI 326

  Fly   355 NSLMTVKKVSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHV 419
            |:|.|.....|:..||:||.:|.:.|.|.|.|.||||:|..|.. |:.|::|.|::.:..:.|..
plant   327 NTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQSRD-TETDIVLKGVVRVTNLEDAS 390

  Fly   420 PAVNLLCERIPRHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAYGYNRGFMTSNGQPDQARSAR 484
            ..:..:..|:.:..|:..|.|        :|.|   ...:.||....:.|.:...|:||....|:
plant   391 EHIGEVLRRVKKEHLQRAYKI--------KDWE---DDHDFLLQLCKSSGKLLKGGEPDLMTGAK 444

  Fly   485 YVLKDYVNGRLLYAMSPPSVPQTEYHTFPERQRRVIEESQ--LPGQQQRAMRINK---------- 537
            .:|.|:..||:.:.:.||.:.            .|..||:  :||..:.|:..|.
plant   445 MILHDWQRGRIPFFVPPPKLD------------NVASESEVIVPGIDKEAIADNSQAAAALKAIA 497

  Fly   538 ---STSKELD----NQFFSDK 551
               ||.::.|    ..|:.:|
plant   498 GIMSTQQQKDVPVQRDFYDEK 518

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns3	NP_569915.1	HSR1_MMR1	164..395	CDD:206750	71/230 (31%)
		RbgA	176..495	CDD:440775	89/318 (28%)
AtNug2	NP_175706.1	NGP1NT	43..169	CDD:462379	33/144 (23%)
		NGP_1	208..364	CDD:206751	68/224 (30%)
		MSCRAMM_ClfA	<479..>574	CDD:468110	7/40 (18%)