DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns3 and EMB3129

DIOPT Version :10

Sequence 1:NP_569915.1 Gene:Ns3 / 31097 FlyBaseID:FBgn0266284 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_192188.2 Gene:EMB3129 / 828174 AraportID:AT4G02790 Length:372 Species:Arabidopsis thaliana


Alignment Length:413 Identity:90/413 - (21%)
Similarity:142/413 - (34%) Gaps:158/413 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 NEAFLDWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVE------------------RSDVVVQ 180
            ||..:||..               .|.::..|.:..|.|:                  ..|||::
plant    73 NEDEIDWMN---------------LESDIRLWTRALRPVQWYPGHIMKTEKELREQLKLMDVVIE 122

  Fly   181 IVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATLV 245
            :.|||.||......::.::    .::..::::|:.|:::.:.|..||.||..:||:..|.:..|.
plant   123 VRDARIPLSTTHPKMDAWL----GNRKRILVLNREDMISNDDRNDWARYFAKQGIKVIFTNGKLG 183

  Fly   246 EEELKREAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQKYKTIPETQNDELPRLPGDKN 310
            ...:|               |.|..:.                                |.||.|
plant   184 MGAMK---------------LGRLAKS--------------------------------LAGDVN 201

  Fly   311 SPR----LLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLMTVKKVSVSATPGK 371
            ..|    ||.|                   .|..|::|||||||||.||.|:..|..:.:..||.
plant   202 GKRREKGLLPR-------------------SVRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGV 247

  Fly   372 TKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHVPAVNL-LCERIPRHVLE 435
            |:..:.:.|.||:.|.|.||:                 ||: ::.|...|:.| :|:.|.....:
plant   248 TREMKWVKLGKDLDLLDSPGM-----------------LPM-RIDDQAAAIKLAICDDIGEKAYD 294

  Fly   436 --DKYGIVIAKPLEGEDMERPPHSEELLLAYGYNR-----------------GFMTSNGQPDQAR 481
              |..||::      :.:.|.|......|   |||                 |.....|...|| 
plant   295 FTDVAGILV------QMLARIPEVGAKAL---YNRYKIQLEGNCGKKFVKTLGLNLFGGDSHQA- 349

  Fly   482 SARYVLKDYVNGRLLYAM--SPP 502
             |..:|.|:..|:..|..  .||
plant   350 -AFRILTDFRKGKFGYVSLERPP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns3NP_569915.1 HSR1_MMR1 164..395 CDD:206750 58/252 (23%)
RbgA 176..495 CDD:440775 79/342 (23%)
EMB3129NP_192188.2 GTPase_YlqF 97..368 CDD:274669 80/369 (22%)

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