DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns3 and NOA1

DIOPT Version :10

Sequence 1:NP_569915.1 Gene:Ns3 / 31097 FlyBaseID:FBgn0266284 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_190329.2 Gene:NOA1 / 823899 AraportID:AT3G47450 Length:561 Species:Arabidopsis thaliana


Alignment Length:430 Identity:73/430 - (16%)
Similarity:132/430 - (30%) Gaps:187/430 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 SAEELVRAENEAFLDWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLL 189
            ||:||           |..|:.|:.::.:::.                     :|.|||.....|
plant   174 SADEL-----------REKLSHLRHEKALIVK---------------------LVDIVDFNGSFL 206

  Fly   190 FRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATLVEEELKREAE 254
            .|       |:::..:...::::.|.|||.                              |....
plant   207 AR-------VRDLVGANPIILVITKIDLLP------------------------------KGTDM 234

  Fly   255 ECLDSFPEVQQLRRAVEEI------KQSLDSVEDALNVIEQKYKTIPETQNDELPRLPGDKNSPR 313
            .|:..:.....:|:.:..:      .:|||.|....:.|:::.|.                    
plant   235 NCIGDWVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKG-------------------- 279

  Fly   314 LLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLM--TVKKVSVSATPGKTKRFQ 376
                       |::|             ::|..|||||:.||:|:  ..::..|:|...|.|..|
plant   280 -----------RDVY-------------ILGAANVGKSAFINALLKTMAERDPVAAAAQKYKPIQ 320

  Fly   377 TLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHVPAVNLLCERIPRHVLEDKYGIV 441
            :.          .||       .|...:.:|..:..:::.| .|.|:          |..:...|
plant   321 SA----------VPG-------TTLGPIQINAFVGGEKLYD-TPGVH----------LHHRQAAV 357

  Fly   442 IAKPLEGEDMERPPHSEELLLAYGYNRGFMTSNGQ-------PDQARSA--RYVLKDYVN--GRL 495
            :             ||::|......||    ..||       |.|:.|:  ...|..|..  |.|
plant   358 V-------------HSDDLPALAPQNR----LRGQSFDISTLPTQSSSSPKGESLNGYTFFWGGL 405

  Fly   496 LYAMSPPSVPQT----------EYHTFPERQRRVIEESQL 525
            :......::|:|          |.|..|.:......|::|
plant   406 VRIDILKALPETCFTFYGPKALEIHAVPTKTATAFYEAKL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns3NP_569915.1 HSR1_MMR1 164..395 CDD:206750 38/238 (16%)
RbgA 176..495 CDD:440775 58/337 (17%)
NOA1NP_190329.2 YqeH 145..348 CDD:206748 49/304 (16%)

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