Protein Alignment Ns3 and gnl1

DIOPT Version :9

• Sequence 1: NP_001284779.1
• Gene: Ns3 / 31097
• FlyBaseID: FBgn0266284
• Length: 606
• Species: Drosophila melanogaster
• Sequence 2: NP_001072441.1
• Gene: gnl1 / 779895
• XenbaseID: XB-GENE-481292
• Length: 612
• Species: Xenopus tropicalis
• Alignment Length: 618
• Identity: 170/618 - (27%)
• Similarity: 268/618 - (43%)
• Gaps: 99/618 - (16%)

  Fly     3 KKNKGGAPNLGRQLIKDRFGHTQRRKVDNDTMLHTTELQDGYDWGRLNLSSVTEESS-FQAFLRT 66
            ::.|.|....||.....|.|..:|.:.:.||       .|.... |..|..|.::.. |:...|.
 Frog    20 RERKRGPSEQGRAESNSRSGSRERWEENTDT-------SDSESL-RPQLRRVNQQPQIFKPGERN 76

  Fly    67 AELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMHQKHDEHRDQ-------LKIPRRPKWTKET 124
            .:........||.....:..::::. |.|..|.....:.:.|.||       |..|:||.||.|.
 Frog    77 YDPNRYRLYFEKETKEEIEQRKKIA-LEKILEPVPESELEVHIDQIYRPGSVLDFPKRPAWTYEM 140

  Fly   125 SAEELVRAENEAFLDWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLL 189
            |.|.:...|.:||.::.:.:.......|  ::.::.|||.|||||||:|.||:::.|.|.|:|:|
 Frog   141 SKEAVQSREEKAFKEYLQKIYESHNPRE--LSYFDHNLETWRQLWRVLEMSDIILLITDIRHPVL 203

  Fly   190 FRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYSATLV--------- 245
            ..|..|..||.: |..:..::::||:||........|..||.::     |....:|
 Frog   204 HFSPALYDYVTQ-ELGRSLILVLNKTDLAPPSLVVAWKHYFQAK-----FPKVHVVCFTSYPRHP 262

  Fly   246 EEE--------LKREAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQKYKTI-------- 294
            |||        .:|.......|.....||.||.|.|......:......||:....:
 Frog   263 EEEQDPSAVFKKRRRKRRVWSSALGPSQLLRACEVITAEKVDLTSWREKIERDSAALCNPASEEG 327

  Fly   295 -PETQNDELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQH----VTVGMVGYPNVGKSSTI 354
             .:.:.|||..:...:     ::..||         |...:|.:    :::|.||:|||||||.|
 Frog   328 TQDEETDELNAVVSHQ-----ITDAEL---------GAPSSELYKDGVLSIGCVGFPNVGKSSLI 378

  Fly   355 NSLMTVKKVSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHV 419
            |.|:..|.||||.|||.||.|||.:|...:.|||||||:.|| ::.:...:|.||.||.|:::..
 Frog   379 NGLVGKKIVSVSRTPGHTKYFQTYYLTPTVRLCDCPGLIFPS-LIDRQQQILAGIYPIAQIQEPY 442

  Fly   420 PAVNLLCERIPRHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAYGYNRGFMTSN-GQPDQARSA 483
            .:|..|..|||...|     :.:.:|   ..:|....:..:..|:...||:.|:. .:.|..|:|
 Frog   443 TSVGYLSCRIPVPQL-----LKLPQP---SGVEGGWTAWSICEAWADKRGYKTAKASRSDTYRAA 499

  Fly   484 RYVLKDYVNGRLLYAMSPP--SVPQTEYHTFPERQRRVIEESQLPGQ---------QQRAMRINK 537
            ..:|:..|:|||...|.||  ||.:..:...||.:...: .||..||         ::....|:.
 Frog   500 NSLLRLAVDGRLCLCMRPPGYSVQKEAWQQHPETKEMAV-HSQAQGQANNDPSSGREEEEEEISS 563

  Fly   538 STSKELDNQFFSDK-------PTHA-HVKGRTN 562
            |..:|.:....:|:       ||.: |.:|..|
 Frog   564 SGEEEEEQDRDADEEEDEEEDPTQSQHKRGNKN 596

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns3	NP_001284779.1	RbgA	161..524	CDD:224083	121/395 (31%)
		HSR1_MMR1	164..395	CDD:206750	83/260 (32%)
		p10	<270..312	CDD:177631	7/50 (14%)
		P-loop_NTPase	313..>357	CDD:304359	16/47 (34%)
gnl1	NP_001072441.1	RbgA	174..513	CDD:224083	114/367 (31%)
		HSR1_MMR1	178..419	CDD:206750	83/260 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D206558at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010