Protein Alignment Ns3 and CG17141

DIOPT Version :10

• Sequence 1: NP_569915.1
• Gene: Ns3 / 31097
• FlyBaseID: FBgn0266284
• Length: 606
• Species: Drosophila melanogaster
• Sequence 2: NP_651094.2
• Gene: CG17141 / 42697
• FlyBaseID: FBgn0039020
• Length: 323
• Species: Drosophila melanogaster
• Alignment Length: 280
• Identity: 73/280 - (26%)
• Similarity: 115/280 - (41%)
• Gaps: 92/280 - (32%)

  Fly   166 RQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPS--KMNMILVNKSDLLTEEQRRHWAE 228
            ||:.:.:...|.:|:|.|||.||..|::   ::...:..|  |.:::::||.|||..:|::
  Fly    32 RQIQQKLRNVDCIVEIHDARIPLAGRNS---QFFDTITGSGVKPHILVLNKVDLLGAKQQK---- 89

  Fly   229 YFDSEGIRTAFYSATLVEEELKREAEECLDSFPEVQQLRRAVEEIKQSLDSVEDALNVIEQKYKT 293
                                            ..:|||||...|::..|.:     |..:|:
  Fly    90 --------------------------------SVLQQLRRQQPELQHILFT-----NCKDQR--- 114

  Fly   294 IPETQNDELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLM 358
                .|..|..||   .:.||:|  |...|.|.      ...:| .:.::|.|||||||.||.|.
  Fly   115 ----NNGVLDILP---LATRLVS--ESSRFNRT------QAAEH-NLMIIGVPNVGKSSVINVLR 163

  Fly   359 TV--KKVS---VSATPGKTK------RFQTLFLDKDILLCDCPGLVMPSFVLTKAD-----MLLN 407
            .|  ||.|   |.|..|.|:      :.|.   :..:.:.|.||::.||.   |.|     :.|.
  Fly   164 NVHLKKKSAARVGAEAGITRSVGERIKIQE---NPPVYMIDTPGILQPSI---KDDEMGMKLALV 222

  Fly   408 GILPIDQMRDHVPAVNLLCE 427
            |.||     ||:...:|:.:
  Fly   223 GCLP-----DHIVGEDLIAD 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns3	NP_569915.1	HSR1_MMR1	164..395	CDD:206750	62/241 (26%)
		RbgA	176..495	CDD:440775	71/270 (26%)
CG17141	NP_651094.2	GTPase_YlqF	20..317	CDD:274669	73/280 (26%)