DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns3 and gnl3

DIOPT Version :9

Sequence 1:NP_001284779.1 Gene:Ns3 / 31097 FlyBaseID:FBgn0266284 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001263611.1 Gene:gnl3 / 394765 XenbaseID:XB-GENE-6456133 Length:548 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns3NP_001284779.1 RbgA 161..524 CDD:224083
HSR1_MMR1 164..395 CDD:206750
p10 <270..312 CDD:177631
P-loop_NTPase 313..>357 CDD:304359
gnl3NP_001263611.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118
GN3L_Grn1 16..85 CDD:370075
MAT1 <57..>135 CDD:368875
Nucleostemin_like 136..300 CDD:206753
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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