Protein Alignment Ns3 and Noa1

DIOPT Version :10

• Sequence 1: NP_569915.1
• Gene: Ns3 / 31097
• FlyBaseID: FBgn0266284
• Length: 606
• Species: Drosophila melanogaster
• Sequence 2: NP_001388376.1
• Gene: Noa1 / 289562
• RGDID: 1359460
• Length: 694
• Species: Rattus norvegicus
• Alignment Length: 479
• Identity: 102/479 - (21%)
• Similarity: 161/479 - (33%)
• Gaps: 169/479 - (35%)

  Fly   221 EQRRHWAEYFDSEGIRTAFYSATLVEEELK--REAEEC--LDSFPEVQQLRRAVEEIKQSLDSVE 281
            |:|..:.||...   ||.       ||:|:  ||..|.  |....|.|:|:|..|.::|.|.:..
  Rat    68 EERFLFPEYVPE---RTP-------EEQLRELRELRELQQLQQEKERQRLQRREERLQQKLRAGL 122

  Fly   282 DALNVIEQKYKTIPET-------------QNDELP-RLPGDK----------NSPRLLSRLELIE 322
            .||.|.|....::|.:             |:..|| .|||:|          .:..:..|..|:.
  Rat   123 RALPVPELPDASVPPSGIYCSGCGAELHCQHPGLPGYLPGEKFRDAAQAEGGLARTVCQRCWLLV 187

  Fly   323 FLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLMTVKKVSVSATPGKTKRFQTLFLD-KDILL 386
            ..|.........:|::.:........|.:..:                    :....|| .|.||
  Rat   188 HHRRALRLQVSRDQYLELVSTALQRPGPALVL--------------------YMVDLLDLPDALL 232

  Fly   387 CDCPGLVMPS--FVL-TKADMLLNGILPIDQMRDHVPAVNLLCERIPRHVLED--KYGIVIA--- 443
            .|.|.||.|.  ||| .|.|     :||.|     .|.   ..:|:.:.:..|  :.|:|:|
  Rat   233 PDLPKLVGPKQLFVLGNKVD-----LLPQD-----APG---YLQRLRKRLWNDCIRAGLVVAPGH 284

  Fly   444 ---------KPLEGEDMERPPHS--------------------EELLLA----YGYNRGFMTSNG 475
                     :||: |...:.|.|                    |||:.|    :.| ||.:...|
  Rat   285 RGPQYPTGNEPLD-EIKNQNPSSRSRTVVKDVRLISAKTGYGVEELISALQRSWRY-RGDVYLVG 347

  Fly   476 QPDQARSARY---VLKDYVN----------------GRLLYAMSPPSVPQTEYHTFPERQRRVIE 521
            ..:..:|..:   :..||..                |..|..:..|....|.|..| :||:|:
  Rat   348 TTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF-KRQKRL-- 409

  Fly   522 ESQLPGQQQRAMRINKSTSKELDNQFFSDKPTHAHVKGRT----------------NFPNVRLAN 570
                   |:.|.:..:..|::..:| .:....|.::.||.                .|....||.
  Rat   410 -------QEDASKTEEDLSEQEQSQ-LNQLKKHGYIVGRVGRTFLHSRQQKEEVPFEFDADSLAF 466

  Fly   571 DGSLVAGNDPAAKPWRHVKKERRE 594
            |    .||:|...    |:|..::
  Rat   467 D----MGNEPVVS----VRKSTKQ 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns3	NP_569915.1	HSR1_MMR1	164..395	CDD:206750	46/202 (23%)
		RbgA	176..495	CDD:440775	78/362 (22%)
Noa1	NP_001388376.1	YqeH	180..396	CDD:206748	48/250 (19%)