DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns3 and LOC1279694

DIOPT Version :10

Sequence 1:NP_569915.1 Gene:Ns3 / 31097 FlyBaseID:FBgn0266284 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_319462.5 Gene:LOC1279694 / 1279694 VectorBaseID:AGAMI1_002582 Length:697 Species:Anopheles gambiae


Alignment Length:442 Identity:83/442 - (18%)
Similarity:150/442 - (33%) Gaps:138/442 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NLGRQLIKD--RFGHTQRRKVD------NDTMLHTT-----ELQDGYDWGRLNLSSVTEESSFQA 62
            ||.|:|:..  ....|.....|      .|.:|:::     :|:.||...:: |.|..::.....
Mosquito    25 NLNRRLVNQSKTLISTDANNTDTLYSKWKDKLLYSSFVEKHQLKLGYKQNKI-LESKLKKYEQNE 88

  Fly    63 FLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMHQKHDEHRDQLKIPRRPKWTKETSAE 127
            |.:|:.               |.|...|  |.:.|.....::.|.:...::|..||. |.:...:
Mosquito    89 FKKTSA---------------VKPFALV--LKQLQTPLRDERSDCYESCVEIADRPS-THQLPYQ 135

  Fly   128 EL----------VRAENEAFL--DWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVERSDVVVQ 180
            .|          ::..||...  :|..|.....|.||.:.:.|                     .
Mosquito   136 HLTLQVKTHQNSIQEPNEKLSTGEWMSDFEYYDETEENVTSFY---------------------G 179

  Fly   181 IVDARNPL-LFRSADLERYVKEVEPSKMNMIL------VNKSDLLTEE-QRRHWAEYFD------ 231
            ..|...|. ..........:..:|||....:.      .:|..|||.. ||.|:.::::      
Mosquito   180 TPDPNEPASTIPCGGCGALLHCIEPSIPGYLPGQLFKGKSKEQLLTTNCQRCHFLKHYNVAVNVT 244

  Fly   232 ---------SEGIRTAFYSATLVEEELKREAEECLDSFP--------EVQQLRRAVEEIKQSLDS 279
                     ...|:|....|.|:.:.|         .||        |:..::|.:..:...:|.
Mosquito   245 VSANDYIGILSSIKTKKALAVLLVDVL---------DFPCSIWPGLSEILGVQRPIIVVGNKVDL 300

  Fly   280 V-EDALNVIEQKYKTIPETQNDELPRLPG-DKNSPRLLSRL---------ELIEFLRNIYTGPRH 333
            : :|:...:|...:.:..:..:.     | .:|:.:.:|.:         |||..:.|:: |.|.
Mosquito   301 LPQDSAGYLENVRQCLTRSVIES-----GFSRNNIKHVSLISASTGYGVEELITKIHNVW-GTRG 359

  Fly   334 TEQHVTVGMVGYPNVGKSSTINSLM-----------TVKKVSVSATPGKTKR 374
                 .|.:||..|||||:..|.|:           .::|.:.|..||.|.|
Mosquito   360 -----DVYLVGCTNVGKSTLFNVLLRSDLCKVQATDLIQKATASPWPGTTIR 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns3NP_569915.1 HSR1_MMR1 164..395 CDD:206750 49/264 (19%)
RbgA 176..495 CDD:440775 49/252 (19%)
LOC1279694XP_319462.5 None

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