Sequence 1: | NP_569913.1 | Gene: | Lrpprc2 / 31095 | FlyBaseID: | FBgn0027794 | Length: | 1072 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001321172.1 | Gene: | AT1G06710 / 837181 | AraportID: | AT1G06710 | Length: | 997 | Species: | Arabidopsis thaliana |
Alignment Length: | 1056 | Identity: | 182/1056 - (17%) |
---|---|---|---|
Similarity: | 327/1056 - (30%) | Gaps: | 379/1056 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 140 SQERLQLFKG---LWAQLIKLGQPTLAHYHTKLQVLRQNRLPLTDYRSLLAEIAVYHGAADSTLY 201
Fly 202 GALLDVAGAAGNMRMATEILSEMRERSLALTEHNFHALLLGHARSGDLPGAESVLASMRAAGIQQ 266
Fly 267 GSSTQAIWFEALLENGQLAQAKELLQVEHGFTAP-QLLQMLRGLLASKDVDTDLIQLLVKELPRE 330
Fly 331 FLTGIDLPPAIRSLCIQLVHQGRTEVVIQLVGALPAPKFELQNQNVDEYGALLLQEFFRAQVPLD 395
Fly 396 QTIQFAGQLVQRNQNVRALHLVAELALRRQPSSALRCLE-DLSAAGEELRPHYFWPLILHHYRRE 459
Fly 460 GESGMLRLVSEMRRLRVECDEETLRHYLFPHLRQTLVQPLEAVKALESAGVKPSQTL-CPVVSHL 523
Fly 524 LQQHQMSEVLDLLDR------YPTRLDLATLLQPLSSLAVNARATKRFEVFAKVIQALQQKALKR 582
Fly 583 GEDFVGSLLLQMTGPQTRLRQDATSLRRFLHELRRLELQISPAASEALLSVVRHA---TDDVDLI 644
Fly 645 QDLAKTLQKMKNPQLALPADTV------SLHGGFIKHPRDMSIDELECHLVELESK---QLNPRG 700
Fly 701 VLRRLLQLS------VRSGRLERAQQLLAK--------------------CQVLKVQ-------- 731
Fly 732 -ESAGMMASIF-----------------------------------------DLHIKLRDLPRAQ 754
Fly 755 ESLERLSS--MYPAFQIDEHKVIDYAALL---VQGQQLEAAKQLLQRRAEQHKVVGGDYVMK--- 811
Fly 812 ------NVWQLLTNVGQLAASSHAGGESSKQLNQTREWLDFLRGLGYCQSQNALLGPVVREWLLK 870
Fly 871 GNLDAAVAEFQRLANTHKHTPLQFELLSLLVRLGNGDEQELTR--FPGVTAESAQQHLAVVTATV 933
Fly 934 SRIHGAANMNSA--LLLALAESGKETQLRRLIINPEFRINHELLVKNCEHLGQEGAVRTLLRLAR 996
Fly 997 --GVRGVQRTIDEQKIYDLLLAQFCRSNDYEAALDLFERLEADDELKVSH--------------- 1044
Fly 1045 --EFLRNLVQLLQVNQ 1058 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrpprc2 | NP_569913.1 | PLN03218 | <197..>292 | CDD:215636 | 23/94 (24%) |
PPR repeat | 201..227 | CDD:276811 | 6/25 (24%) | ||
PPR repeat | 233..262 | CDD:276811 | 6/28 (21%) | ||
PPR repeat | 268..292 | CDD:276811 | 4/23 (17%) | ||
AT1G06710 | NP_001321172.1 | PPR repeat | 167..194 | CDD:276811 | 7/43 (16%) |
PLN03218 | <204..>608 | CDD:215636 | 80/558 (14%) | ||
PPR repeat | 204..229 | CDD:276811 | 5/33 (15%) | ||
PPR repeat | 235..261 | CDD:276811 | 6/44 (14%) | ||
PPR repeat | 304..331 | CDD:276811 | 6/26 (23%) | ||
PPR repeat | 337..366 | CDD:276811 | 7/50 (14%) | ||
PPR repeat | 372..400 | CDD:276811 | 7/31 (23%) | ||
PPR repeat | 485..512 | CDD:276811 | 2/26 (8%) | ||
PLN03218 | <520..>911 | CDD:215636 | 67/395 (17%) | ||
PPR repeat | 520..547 | CDD:276811 | 0/26 (0%) | ||
PPR repeat | 553..582 | CDD:276811 | 4/28 (14%) | ||
PPR repeat | 588..614 | CDD:276811 | 7/25 (28%) | ||
PPR repeat | 639..665 | CDD:276811 | 8/33 (24%) | ||
PPR repeat | 674..702 | CDD:276811 | 5/28 (18%) | ||
PPR repeat | 711..738 | CDD:276811 | 5/26 (19%) | ||
PPR repeat | 746..773 | CDD:276811 | 3/26 (12%) | ||
PPR repeat | 779..808 | CDD:276811 | 6/41 (15%) | ||
PPR repeat | 814..842 | CDD:276811 | 7/33 (21%) | ||
PPR repeat | 884..909 | CDD:276811 | |||
PPR repeat | 915..948 | CDD:276811 | |||
PPR_2 | 921..966 | CDD:404055 | |||
PPR repeat | 954..978 | CDD:276811 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 109 | 1.000 | Inparanoid score | I2075 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.050 |