Sequence 1: | NP_569913.1 | Gene: | Lrpprc2 / 31095 | FlyBaseID: | FBgn0027794 | Length: | 1072 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_200798.1 | Gene: | AT5G59900 / 836112 | AraportID: | AT5G59900 | Length: | 907 | Species: | Arabidopsis thaliana |
Alignment Length: | 662 | Identity: | 121/662 - (18%) |
---|---|---|---|
Similarity: | 215/662 - (32%) | Gaps: | 219/662 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 118 VGIEEVHFLL-----------GSCVPELLPAQSSQERLQLFKGLWAQLIKLG-QPTLAHYHTKLQ 170
Fly 171 VLRQNRLPLTDYRSLLAEIAVYHGA-------------ADSTLYGALLDVAGAAGNMRMATEILS 222
Fly 223 EMRERSLALTEHNFHALLLGHARSGDLPGAESVLASMRAAGIQQGSSTQAIWFEALLENGQLAQA 287
Fly 288 K--ELLQVEHGFTAPQLLQMLRGLLASKDVDTDLIQLLVKELPREFLTGIDLPPAIRSLCIQLVH 350
Fly 351 QGRTEVVIQLVGALPAPKFELQNQNVD----EYGALLLQEFFRAQVPLDQTIQFAGQLVQRN--- 408
Fly 409 QNVRALHLVAELALRRQPSSALRCLEDLSAAGEELRPHYFWPLILHHYRREGE-SGMLRLVSEMR 472
Fly 473 RLRVECD--------EETLRH---YLFPHLRQTLVQPLEAVKALESAGVKPSQTL-CPVVSHLLQ 525
Fly 526 QHQMSEVLDLLDRYPTRLDLATLLQPLSSLAVNARATKRFEVFAKVIQALQQKALKRGEDFVGSL 590
Fly 591 LLQMTGPQTRLRQDATSLRRFLHELRRLELQISPAASEALLSVVRHATDD--VDLIQDLAKTLQK 653
Fly 654 MKNPQLALPADTVSLHGGFIKHPRDMSIDELECHLVELESKQLNPRGVL------RRLLQLSVRS 712
Fly 713 GRLERAQQLLAK 724 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrpprc2 | NP_569913.1 | PLN03218 | <197..>292 | CDD:215636 | 23/96 (24%) |
PPR repeat | 201..227 | CDD:276811 | 8/25 (32%) | ||
PPR repeat | 233..262 | CDD:276811 | 9/28 (32%) | ||
PPR repeat | 268..292 | CDD:276811 | 3/25 (12%) | ||
AT5G59900 | NP_200798.1 | PPR repeat | 106..133 | CDD:276811 | |
PPR repeat | 159..185 | CDD:276811 | |||
PPR_2 | 190..238 | CDD:404055 | |||
PPR repeat | 194..221 | CDD:276811 | |||
PLN03218 | <220..>589 | CDD:215636 | 62/337 (18%) | ||
PPR repeat | 227..256 | CDD:276811 | |||
PPR repeat | 262..288 | CDD:276811 | |||
PPR repeat | 299..326 | CDD:276811 | 3/10 (30%) | ||
PPR repeat | 336..361 | CDD:276811 | 7/28 (25%) | ||
PPR repeat | 369..396 | CDD:276811 | 5/40 (13%) | ||
PPR repeat | 404..431 | CDD:276811 | 8/26 (31%) | ||
PLN03218 | <440..>835 | CDD:215636 | 93/519 (18%) | ||
PPR repeat | 440..466 | CDD:276811 | 10/29 (34%) | ||
PPR repeat | 474..501 | CDD:276811 | 6/34 (18%) | ||
PPR repeat | 507..536 | CDD:276811 | 9/60 (15%) | ||
PPR repeat | 542..571 | CDD:276811 | 3/30 (10%) | ||
PPR repeat | 577..601 | CDD:276811 | 6/23 (26%) | ||
PPR repeat | 612..641 | CDD:276811 | 9/29 (31%) | ||
PPR repeat | 649..676 | CDD:276811 | 6/36 (17%) | ||
PPR repeat | 682..711 | CDD:276811 | 3/45 (7%) | ||
PPR repeat | 717..744 | CDD:276811 | 8/57 (14%) | ||
PPR repeat | 789..816 | CDD:276811 | 7/24 (29%) | ||
PPR_2 | 820..868 | CDD:404055 | |||
PPR repeat | 822..851 | CDD:276811 | |||
PPR_2 | 855..>894 | CDD:404055 | |||
PPR repeat | 857..885 | CDD:276811 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 109 | 1.000 | Inparanoid score | I2075 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.960 |