Sequence 1: | NP_569913.1 | Gene: | Lrpprc2 / 31095 | FlyBaseID: | FBgn0027794 | Length: | 1072 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_194913.1 | Gene: | PGR3 / 829314 | AraportID: | AT4G31850 | Length: | 1112 | Species: | Arabidopsis thaliana |
Alignment Length: | 1081 | Identity: | 191/1081 - (17%) |
---|---|---|---|
Similarity: | 364/1081 - (33%) | Gaps: | 345/1081 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 SLLQMRSLGTGGVLSAVERRSRRPASSSE---KPKASVADAWTQLEAYYRQHDLINFEH----CQ 103
Fly 104 RLLELLQESASPLGVGIEEVHFLLGSCVPELLPAQSSQERLQLFKGLWAQLIKLGQPTLAHYHTK 168
Fly 169 LQVLRQNRLPLTDYRSLLAEIAVYHGAADSTLYGALLDVAGAAGNMRMATEILSEMRERSL---A 230
Fly 231 LTEHNFHALLLGHARSGDLPGAESVLASMRAAGIQQGSSTQAIWFEALLENGQLAQAKELL-QVE 294
Fly 295 HGFTAPQLLQ---MLRGLLASKDVDTDLIQLLVKELPREFLTGIDLPPAIRSLCIQLVHQGRTEV 356
Fly 357 VIQLVGALPAPKFELQNQNVDEYGALLLQEFFR-----AQVP-------LDQTIQFAGQL----- 404
Fly 405 ---VQRNQNVRA-LH----LVAELALRRQPSSALRCLEDLSAAGEELRP-HYFWPLILHHYRREG 460
Fly 461 ESGMLRLVSEMRRLRVECDEETLRHYLFPHLRQTLVQPLEAVKALESAGVKPSQTLCPVVSHLLQ 525
Fly 526 QHQMSEVLDLLDRYPTRLDLATLLQPLSSLAVNARATKRFEVF------AKVIQALQQKALKRGE 584
Fly 585 DFVGSLLLQMTGPQTRLRQDATSLRRFLHELRRLELQISPAASEALLSVVRHATDDVDLIQDLAK 649
Fly 650 TLQKMKNPQLALPADTVSLHGGFIKHPRDMSIDELECHLVELESKQLNPRGVLRRLLQLSV-RSG 713
Fly 714 RLERAQQLLAKCQVLKVQESAGMMA-----------SIFDLHIKLRDLPRAQESLERLSSMYPAF 767
Fly 768 QIDEHKVIDYAALLVQGQQLEAAKQLLQRRAEQHKVVGGDYV--------------MKNVWQLLT 818
Fly 819 N-----------------VGQLAASSHAGGESSKQLNQTREWLDFLRGLGYCQSQNALLGPVVRE 866
Fly 867 WLLKGNLDAAVAEFQRLANTHKHTPLQFELLSLLVRLGNGDEQELTRFPGVTAESAQQHLAVVTA 931
Fly 932 TVSRIHGAANMNSALLLALAESGKETQLRRLIINPEFRINHELLVKNCEHLGQEGAVRTLLRLAR 996
Fly 997 GVRGVQRTIDEQKIYDLLLAQFCRSNDYEAALDLFERLEAD 1037 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrpprc2 | NP_569913.1 | PLN03218 | <197..>292 | CDD:215636 | 21/98 (21%) |
PPR repeat | 201..227 | CDD:276811 | 6/25 (24%) | ||
PPR repeat | 233..262 | CDD:276811 | 5/28 (18%) | ||
PPR repeat | 268..292 | CDD:276811 | 7/24 (29%) | ||
PGR3 | NP_194913.1 | PPR repeat | 120..147 | CDD:276811 | 6/32 (19%) |
PPR repeat | 155..182 | CDD:276811 | 9/32 (28%) | ||
PPR_2 | 187..235 | CDD:289786 | 13/67 (19%) | ||
PPR | 189..222 | CDD:273253 | 11/52 (21%) | ||
PPR repeat | 190..217 | CDD:276811 | 9/46 (20%) | ||
PPR_2 | 221..270 | CDD:289786 | 9/48 (19%) | ||
PPR | 225..258 | CDD:273253 | 6/32 (19%) | ||
PPR repeat | 225..252 | CDD:276811 | 5/26 (19%) | ||
PPR_2 | 256..304 | CDD:289786 | 8/47 (17%) | ||
PPR repeat | 258..287 | CDD:276811 | 7/28 (25%) | ||
PPR | 259..293 | CDD:273253 | 8/33 (24%) | ||
PPR_1 | 287..320 | CDD:289614 | 5/38 (13%) | ||
PPR repeat | 293..320 | CDD:276811 | 4/32 (13%) | ||
PPR_2 | 326..375 | CDD:289786 | 8/73 (11%) | ||
PPR | 329..363 | CDD:273253 | 6/58 (10%) | ||
PPR repeat | 330..357 | CDD:276811 | 4/51 (8%) | ||
PPR_1 | 357..390 | CDD:289614 | 6/32 (19%) | ||
PPR_2 | 361..408 | CDD:289786 | 10/46 (22%) | ||
PPR repeat | 365..392 | CDD:276811 | 5/26 (19%) | ||
PPR_1 | 392..425 | CDD:289614 | 7/32 (22%) | ||
PPR_2 | 396..445 | CDD:289786 | 10/50 (20%) | ||
PPR repeat | 398..427 | CDD:276811 | 6/28 (21%) | ||
PPR repeat | 433..462 | CDD:276811 | 7/61 (11%) | ||
PPR | 434..468 | CDD:273253 | 9/66 (14%) | ||
PPR_2 | 466..515 | CDD:289786 | 9/79 (11%) | ||
PPR repeat | 470..497 | CDD:276811 | 7/57 (12%) | ||
PPR_2 | 501..550 | CDD:289786 | 13/80 (16%) | ||
PPR | 504..538 | CDD:273253 | 8/65 (12%) | ||
PPR repeat | 505..532 | CDD:276811 | 6/43 (14%) | ||
PPR_1 | 532..565 | CDD:289614 | 12/71 (17%) | ||
PPR repeat | 538..567 | CDD:276811 | 10/52 (19%) | ||
PPR_1 | 569..600 | CDD:289614 | 8/41 (20%) | ||
PPR_2 | 571..620 | CDD:289786 | 10/59 (17%) | ||
PPR repeat | 575..602 | CDD:276811 | 6/37 (16%) | ||
PPR_2 | 606..655 | CDD:289786 | 8/49 (16%) | ||
PPR repeat | 608..637 | CDD:276811 | 5/28 (18%) | ||
PPR | 609..643 | CDD:273253 | 6/33 (18%) | ||
PPR_1 | 637..670 | CDD:289614 | 8/33 (24%) | ||
PPR_2 | 641..689 | CDD:289786 | 11/52 (21%) | ||
PPR repeat | 643..671 | CDD:276811 | 7/32 (22%) | ||
PPR repeat | 755..779 | CDD:276811 | 5/26 (19%) | ||
PPR_2 | 787..832 | CDD:289786 | 13/53 (25%) | ||
PPR repeat | 787..814 | CDD:276811 | 6/33 (18%) | ||
PPR_1 | 815..847 | CDD:289614 | 12/40 (30%) | ||
PPR_2 | 818..867 | CDD:289786 | 15/82 (18%) | ||
PPR repeat | 822..849 | CDD:276811 | 10/35 (29%) | ||
PPR_1 | 851..877 | CDD:289614 | 6/50 (12%) | ||
PPR repeat | 857..885 | CDD:276811 | 6/28 (21%) | ||
PPR_2 | 889..938 | CDD:289786 | |||
PPR | 892..926 | CDD:273253 | |||
PPR repeat | 893..920 | CDD:276811 | |||
PPR_2 | 924..972 | CDD:289786 | |||
PPR | 928..960 | CDD:273253 | |||
PPR repeat | 928..955 | CDD:276811 | |||
PPR_2 | 959..1008 | CDD:289786 | |||
PPR repeat | 961..990 | CDD:276811 | |||
PPR | 963..996 | CDD:273253 | |||
PPR_1 | 991..1023 | CDD:289614 | |||
PPR repeat | 996..1025 | CDD:276811 | |||
PPR_2 | 1030..1077 | CDD:289786 | |||
PPR repeat | 1032..1061 | CDD:276811 | |||
PPR | 1033..1067 | CDD:273253 | |||
PPR_2 | 1065..1105 | CDD:289786 | |||
PPR repeat | 1067..1094 | CDD:276811 | |||
PPR | 1068..1102 | CDD:273253 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 109 | 1.000 | Inparanoid score | I2075 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.960 |