Sequence 1: | NP_569913.1 | Gene: | Lrpprc2 / 31095 | FlyBaseID: | FBgn0027794 | Length: | 1072 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523596.2 | Gene: | bsf / 35100 | FlyBaseID: | FBgn0284256 | Length: | 1412 | Species: | Drosophila melanogaster |
Alignment Length: | 981 | Identity: | 257/981 - (26%) |
---|---|---|---|
Similarity: | 449/981 - (45%) | Gaps: | 118/981 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 128 GSCVPELLPAQSSQERLQLFKGLWAQLIKLGQP-TLAHYHTKLQVLRQNR--LPLTDYRSLLAEI 189
Fly 190 AVYHGAADSTLYGALLDVAGAAGNMRMATEILSEMRERSLALTEHNFHALLLGHARSGDLPGAES 254
Fly 255 VLASMRAAGIQQGSSTQAIWFEALLENGQLAQAKELLQVEHGFTAPQLLQMLRGLLASKDVDTDL 319
Fly 320 IQLLV----KELPREFLTGIDLPPAIR----SLCIQLVHQGRTEVVIQLVGALPAPKFELQNQNV 376
Fly 377 DEYGALLLQEFFRAQVPLDQTIQFAGQLVQRNQNVRALHLVAELALRRQP-SSALRCLEDLSAAG 440
Fly 441 EELRPHYFWPLILHHYRREGESG-MLRLVSEMRR-LRVECDEETLRHYLFPHLRQTLVQPLEAVK 503
Fly 504 ALESAGVKPSQTLCPVVSHLLQQHQMSEVLDLLDRYPTRLDLATLLQPLSSLAVNARATKRFEVF 568
Fly 569 AKVI----QALQQKALKRGE-----------------DFVGSLLLQMTGPQTRLRQD-ATSLRRF 611
Fly 612 LHELRRLELQIS----PAASEALLSVVRHATDDVDLIQDLAKTLQKMKNPQLALPADTVSLHGGF 672
Fly 673 IKHPRDMSIDELECHLVELESKQLNPRGVLRRLLQLSVRSGRLERAQQLLAKCQVLKVQESAGMM 737
Fly 738 ASIFDLHIKLRDLPRAQESLERLSSMYPAFQIDEHKVIDYAALLVQGQQLEAAKQLLQRRAEQHK 802
Fly 803 V--VGGDY-VMKNVWQLLTNVGQLAASSHAGGESSKQLNQTREWLDFLRGLGYCQSQNALLGPVV 864
Fly 865 REWLLKGNLDAAVAEFQRLANTHKHTPLQFELLSLLVRLGNGDEQELTRFPGVTAESAQQHLAVV 929
Fly 930 TATVSRIHGAANMNSALLLALAESGKETQLRRLIINPEFRINHELLVKNCEHLGQEGAVRTLLRL 994
Fly 995 ARGVRGVQRTIDEQKIYDLLLAQFCRSNDYEAALDLFERLEADDELKVSHEFLRNLVQLLQVNQV 1059
Fly 1060 EIPSTI 1065 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrpprc2 | NP_569913.1 | PLN03218 | <197..>292 | CDD:215636 | 31/94 (33%) |
PPR repeat | 201..227 | CDD:276811 | 9/25 (36%) | ||
PPR repeat | 233..262 | CDD:276811 | 11/28 (39%) | ||
PPR repeat | 268..292 | CDD:276811 | 7/23 (30%) | ||
bsf | NP_523596.2 | PPR_2 | 139..187 | CDD:289786 | 13/50 (26%) |
PPR repeat | 142..169 | CDD:276811 | 11/29 (38%) | ||
PPR_1 | 169..202 | CDD:289614 | 7/32 (22%) | ||
PPR_2 | 173..222 | CDD:289786 | 17/48 (35%) | ||
PPR repeat | 177..204 | CDD:276811 | 9/26 (35%) | ||
PPR repeat | 210..239 | CDD:276811 | 11/28 (39%) | ||
PPR_2 | 213..257 | CDD:289786 | 14/43 (33%) | ||
PPR repeat | 245..274 | CDD:276811 | 8/37 (22%) | ||
Pterin_binding | <456..>543 | CDD:294150 | 21/91 (23%) | ||
PPR repeat | 681..704 | CDD:276811 | 8/22 (36%) | ||
PPR repeat | 710..739 | CDD:276811 | 7/28 (25%) | ||
PPR repeat | 780..818 | CDD:276811 | 12/48 (25%) | ||
PPR repeat | 825..854 | CDD:276811 | 9/28 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45457817 | |
Domainoid | 1 | 1.000 | 76 | 1.000 | Domainoid score | I8940 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4318 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 109 | 1.000 | Inparanoid score | I2075 |
Isobase | 1 | 0.950 | - | 0.759104 | Normalized mean entropy | S7417 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D5844at6960 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm3507 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR46669 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.850 |