DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr2a and Gr93d

DIOPT Version :9

Sequence 1:NP_001162633.1 Gene:Gr2a / 31093 FlyBaseID:FBgn0265139 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_732666.1 Gene:Gr93d / 117470 FlyBaseID:FBgn0045468 Length:381 Species:Drosophila melanogaster


Alignment Length:453 Identity:82/453 - (18%)
Similarity:152/453 - (33%) Gaps:161/453 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VCNLWPWRLAPPPDS----EGILLRRSRWLELYGW-TVLIAATSFTVYGLFQESSVEEKQ-DSES 74
            ||    :||....|:    |.|...||||    .| :|.:......:|.......:..:. .:|.
  Fly    24 VC----FRLRKQKDNNVWLEEIWSNRSRW----KWISVTLRIVPLCIYAFTYAEWISNRMLITEK 80

  Fly    75 TISSIGHTVD---FIQLVGMRVAHLAALLEALWQRQAQRGFFAELG-EIDRLLSKALRVDVEAMR 135
            .:.|....|.   ::.::.:::.|                     | |:.:|:::.|.: .....
  Fly    81 FLHSCSLVVSIPCYLSIIHLKICH---------------------GPEVTKLVNQYLHI-FRLGT 123

  Fly   136 INMRRQT---SRRAVWILWGYAVSQ------LLILGAKLLSRGDRFPIYWISYLLPLLVC----- 186
            :::||::   ..|.:::|......|      :|::.::|.  |.:..|:|:||....::|     
  Fly   124 LDIRRRSQFGGGRELFLLILSVCCQIHEYVFILVIASRLC--GFQHIIWWVSYTYVFIICNSIMC 186

  Fly   187 ---------GLRYFQIFNATQLVRQRLDVLLVALQQLQLHQKGPA----VDTVLEEQEDLEE--- 235
                     |:.|.:: |.............:..||....||..|    :.:|:...:|:..   
  Fly   187 FGFIWHLSLGVLYAEL-NDNLRFESGFQTAFLRKQQRIRVQKSMALFKEISSVVTSLQDIFNVHL 250

  Fly   236 --AAMDRLIAVRLVYQ-----------RVWALVALLNRCYGLSMLMQVGNDFLAI--TSNCYWMF 285
              :|:..|:.|.:|:.           |:|:        :.|..|:|.....|||  .:|     
  Fly   251 FLSALLTLLQVLVVWYKMIIDLGFSDFRIWS--------FSLKNLIQTLLPVLAIQEAAN----- 302

  Fly   286 LNFRQSAASPFDILQIVASGVWSAPHLGNVLVLSLLCDRTAQCASRLALCLHQVSVDLRNESHNA 350
             .|:|:.....||..:..|..|                              ..||:        
  Fly   303 -QFKQTRERALDIFLVGKSKHW------------------------------MKSVE-------- 328

  Fly   351 LVGTLVRYCAPLIILVPLQITQFSLQLLHQRLHFSAAGFFNVDCTLLYTIVGATTTYLIILIQ 413
                        |.:..|.:::|.:.||         |.|||...|...||.|...||:.:.|
  Fly   329 ------------IFVTHLNLSEFRVNLL---------GLFNVSNELFLIIVSAMFCYLVFVTQ 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr2aNP_001162633.1 7tm_7 7..418 CDD:285581 82/453 (18%)
Gr93dNP_732666.1 7tm_7 11..375 CDD:285581 82/453 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.