Protein Alignment ssx and NUC-L1

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_175322.1
• Gene: NUC-L1 / 841314
• AraportID: AT1G48920
• Length: 557
• Species: Arabidopsis thaliana
• Alignment Length: 349
• Identity: 68/349 - (19%)
• Similarity: 132/349 - (37%)
• Gaps: 76/349 - (21%)

  Fly     2 SNADKMQDQEHDDEQ---------SSDIEGSGDNVGRDDGTDDDDDSNGNMQQENGDGGNGGDGQ 57
            |::|...|::.:||:         ::....|.|:  .|:.:|::.:.....|::.....:.....
plant   185 SSSDDDSDEDSEDEKPATKKAAPAAAKAASSSDS--SDEDSDEESEDEKPAQKKADTKASKKSSS 247

  Fly    58 EHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTS-------------------ATNLIINYLPQD 103
            :.|.:.|:..|:|.|..........:|...:::|                   |.||..|....|
plant   248 DESSESEEDESEDEEETPKKKSSDVEMVDAEKSSAKQPKTPSTPAAGGSKTLFAANLSFNIERAD 312

  Fly   104 MTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSY 168
            :.     |.|...|.:...:...:...|...|:|.|::.:..:::.|:: .:|..:..:.:::..
plant   313 VE-----NFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKALE-FHGRPLLGREIRLDI 371

  Fly   169 A-------------------RPGGQSIKDTNLYVINLSRNINDD----MLDRIFSPYGLIVQRNI 210
            |                   |.||....:..::|.....::::|    .|...||..|.|...::
plant   372 AQERGERGERPAFTPQSGNFRSGGDGGDEKKIFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSV 436

  Fly   211 LRDKLTGRPRGVAFVRYNKREEAQEAIKALN-NTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGG 274
            ..|:.||..:|:|::.:::.:|     |||. |....||...:.|......|.:...   ...|.
plant   437 PIDRDTGNSKGIAYLEFSEGKE-----KALELNGSDMGGGFYLVVDEPRPRGDSSGG---GGFGR 493

  Fly   275 GNG----GGG----GGPPHMGPGG 290
            |||    |||    ||....|.||
plant   494 GNGRFGSGGGRGRDGGRGRFGSGG 517

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	15/98 (15%)
		RRM_SF	179..257	CDD:302621	20/82 (24%)
NUC-L1	NP_175322.1	RRM1_NUCLs	298..375	CDD:240896	15/82 (18%)
		RRM2_NUCLs	402..479	CDD:240897	20/81 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010