DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and AT1G03457

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_973752.1	Gene:	AT1G03457 / 839497	AraportID:	AT1G03457	Length:	438	Species:	Arabidopsis thaliana

Alignment Length:	313	Identity:	78/313 - (24%)
Similarity:	132/313 - (42%)	Gaps:	74/313 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    81 QQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTES 145
            ::.|:..:|   ..|.:..:|:.||:.:|..||.....:|...|:::..|....|..|:...|.
plant     3 EETMENEER---VKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTR- 63

  Fly   146 DSEDAIQKLNGFYVRNKR--------LKVSYARPGGQ----SIKDTN------LYVINLSRNIND 192
              |||.:.:|.|:  ||:        |:|.||  .|:    .:.|.:      |:|..|.:|:::
plant    64 --EDADKVINSFH--NKKTLPGASSPLQVKYA--DGELERLDVLDCSCNPEHKLFVGMLPKNVSE 122

  Fly   193 DMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNT-VPEGGSQPIWVRL 256
            ..:..:||.||.|....|||..|. ..:|..|::|..:|:|..|::|||.. :.||.:.|:.|:.
plant   123 TEVQSLFSEYGTIKDLQILRGSLQ-TSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKW 186

  Fly   257 AEEHGKAKAAQFM------AQIGGGNGGGGGG------PPHMG-----PG--GPMHPPHHHNNHH 302
            |:...:.:|.:.:      :::...|....|.      ||:.|     ||  |.|.||....:..
plant   187 ADTEKERQARRLLKVQSHVSRLDPQNPSMFGALPMSYVPPYNGYGYHVPGTYGYMLPPIQTQHAF 251

  Fly   303 HN----NHHN--------------PHMPPHHHQP-------QHPHQHPQHHPQ 330
            ||    |..|              |.:.|..:.|       .|..|:|...|:
plant   252 HNVISPNQGNGRALQGTALTESVPPRLAPRRNFPTALGNYGYHGLQYPMAFPR 304

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	24/87 (28%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	26/84 (31%)
AT1G03457	NP_973752.1	RRM1_2_CELF1-6_like	13..89	CDD:240807	21/80 (26%)
		PABP-1234	<14..346	CDD:130689	76/299 (25%)
		RRM1_2_CELF1-6_like	110..185	CDD:240807	25/75 (33%)
		RRM3_CELF1-6	341..413	CDD:240808
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010