Protein Alignment ssx and UBA2A

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001190109.1
• Gene: UBA2A / 824853
• AraportID: AT3G56860
• Length: 478
• Species: Arabidopsis thaliana
• Alignment Length: 510
• Identity: 112/510 - (21%)
• Similarity: 172/510 - (33%)
• Gaps: 161/510 - (31%)

  Fly     3 NADKMQDQEHDDEQSSDIEGSGDNVGRDDGTDDDDDSNGNMQQENGDGGNGGDGQEHSGDE---- 63
            :.::::.:|.::||..::|...|   .|||.:::|.::||..:.....|:|  .||...||
plant    42 DVEEVEYEEVEEEQEEEVEDDDD---EDDGDENEDQTDGNRIEAAATSGSG--NQEDDDDEPIQD 101

  Fly    64 -------EQHHSQDNEGNDNSAGQQQQMQQVDRTSATN--LIINYLPQDMTDRELYNLFSGCGPI 119
                   ||..|...|..:.......::::|......:  :.::.|..|.....|...|...|.|
plant   102 LLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEI 166

  Fly   120 NTCKIMRDFKTGYSFGYGFVDYKTESDSEDAI---QKLNGFYVRNKRLKVSYARPGGQSI----- 176
            ..||.:.|..:|.|.||||:.||:.|.:.:|:   ||..|..:...:|.......||..|
plant   167 EDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAV 231

  Fly   177 -----------KDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKR 230
                       ....:||.|:...::...|...||.:|.|.:..:..||.||||:|.....|...
plant   232 SAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSS 296

  Fly   231 EEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGGGGPPHM--------G 287
            |.|:.|::..:.|. ||                                     |:        |
plant   297 ESAKRALEEPHKTF-EG-------------------------------------HILHCQKAIDG 323

  Fly   288 PGGPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHH 352
            |.......||||.|.:||       |.:.:                      |::|...|...|.
plant   324 PKPGKQQQHHHNPHAYNN-------PRYQR----------------------NDNNGYGPPGGHG 359

  Fly   353 NNNNNNHHNMGGPHPHHMQQMHP----------------------------------MGMNMGMG 383
            :....|...||||   ..|.::|                                  .|:|.|.|
plant   360 HLMAGNPAGMGGP---TAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNPGNG 421

  Fly   384 VNMGMGMGM------GMPIHGGGGGGGGG------GGGGGGGNFHHMAHRGEVFM 426
            |.|..|.|.      .||.:|...|..||      |.||.....|.:...|..:|
plant   422 VGMPTGYGTQAMAPGTMPGYGTQPGLQGGYQTPQPGQGGTSRGQHGVGPYGTPYM 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	23/84 (27%)
		RRM_SF	179..257	CDD:302621	22/77 (29%)
UBA2A	NP_001190109.1	PABP-1234	136..>347	CDD:130689	59/277 (21%)
		RRM_SF	140..215	CDD:418427	22/74 (30%)
		Med15	361..>465	CDD:312941	24/106 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920