Protein Alignment ssx and NUC-L2

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_188491.1
• Gene: NUC-L2 / 821392
• AraportID: AT3G18610
• Length: 636
• Species: Arabidopsis thaliana
• Alignment Length: 321
• Identity: 60/321 - (18%)
• Similarity: 117/321 - (36%)
• Gaps: 82/321 - (25%)

  Fly     6 KMQDQEHDDEQSSDIE---------------GSGDNVGRDDGTDDDDDSNGNMQQENGDGGNGGD 55
            |.:....::|.|||.|               .:.|:...::.:|:::..:.....:.....:...
plant   262 KAESSSSEEESSSDDEPTPAKKPTVVKNAKPAAKDSSSSEEDSDEEESDDEKPPTKKAKVSSKTS 326

  Fly    56 GQEHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSA------------TN--------LIINYL 100
            .||.|.||....|...|..|.....:::...|:...|            ||        |....|
plant   327 KQESSSDESSDESDKEESKDEKVTPKKKDSDVEMVDAEQKSNAKQPKTPTNQTQGGSKTLFAGNL 391

  Fly   101 PQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYV--RNKR 163
            ...:...::.|.|...|.:...: :..|..|...|||.:::.:..:::.|:: :||..:  |:.|
plant   392 SYQIARSDIENFFKEAGEVVDVR-LSSFDDGSFKGYGHIEFASPEEAQKALE-MNGKLLLGRDVR 454

  Fly   164 LKVSYAR-------PG--GQSIKDTNLYVINLSRNINDDMLDR----IFSPYGLIVQRNILRDKL 215
            |.::..|       ||  |:..:...:||...|.::.:|.:.:    .||..|.:.:.::..|:.
plant   455 LDLANERGTPRNSNPGRKGEGSQSRTIYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRE 519

  Fly   216 TGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGN 276
            ||..||.|::         :.....:..:...||                     :|||||
plant   520 TGASRGFAYI---------DLTSGFDEALQLSGS---------------------EIGGGN 550

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	21/98 (21%)
		RRM_SF	179..257	CDD:302621	15/81 (19%)
NUC-L2	NP_188491.1	RRM1_NUCLs	385..461	CDD:409884	16/77 (21%)
		RRM2_NUCLs	480..556	CDD:409885	20/101 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010