Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_850472.1 | Gene: | AT2G47310 / 819344 | AraportID: | AT2G47310 | Length: | 512 | Species: | Arabidopsis thaliana |
Alignment Length: | 357 | Identity: | 87/357 - (24%) |
---|---|---|---|
Similarity: | 136/357 - (38%) | Gaps: | 76/357 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 QEHSGDEEQHHSQDNEGN-----------DNSAGQQQQMQQVDRT--SATNLIINYLPQDMTDRE 108
Fly 109 LYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKL-NGFYVRNKRL--KVSYAR 170
Fly 171 PGGQSI--------KDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRD--KLTGRPRGVAFV 225
Fly 226 RYNKREEAQEAIKALNN--TVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGGGGPPHMGP 288
Fly 289 GGPMH-PPHHHNNHHHNNHHNPHMPP---HHH----QPQH-PHQHPQHHPQLHHMQHHH--PNNH 342
Fly 343 N-------------------NNHPNNHHHNNN 355 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 19/82 (23%) |
RRM_SF | 179..257 | CDD:302621 | 30/81 (37%) | ||
AT2G47310 | NP_850472.1 | RRM_SF | 111..190 | CDD:418427 | 18/78 (23%) |
RRM_SF | 208..287 | CDD:418427 | 31/86 (36%) | ||
WW | 406..432 | CDD:395320 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
3 | 2.970 |