Protein Alignment ssx and Cirbp

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: XP_006241075.3
• Gene: Cirbp / 81825
• RGDID: 620756
• Length: 176
• Species: Rattus norvegicus
• Alignment Length: 105
• Identity: 33/105 - (31%)
• Similarity: 58/105 - (55%)
• Gaps: 8/105 - (7%)

  Fly   181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVP 245
            |:|..||.:.|:..|:::||.||.|.:..:::|:.|.|.||..||.:...::|::|:.|:|....
  Rat     8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72

  Fly   246 EGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGG---GG 282
            :|..    :|: ::.||:...:.....||..||.|   ||
  Rat    73 DGRQ----IRV-DQAGKSSDNRSRGYRGGSAGGRGFFRGG 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621
		RRM_SF	179..257	CDD:302621	24/75 (32%)
Cirbp	XP_006241075.3	RRM_CIRBP_RBM3	6..85	CDD:409883	25/81 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910