Protein Alignment ssx and AT2G35410

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_181084.1
• Gene: AT2G35410 / 818107
• AraportID: AT2G35410
• Length: 308
• Species: Arabidopsis thaliana
• Alignment Length: 239
• Identity: 65/239 - (27%)
• Similarity: 103/239 - (43%)
• Gaps: 38/239 - (15%)

  Fly    57 QEHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINT 121
            :|.|.|||....:..|...||..:::            |.:..||..|:..::..||..||.:|.
plant    71 KETSADEETSQEEKTEETQNSNLKRK------------LFVFNLPWSMSVNDISELFGQCGTVNN 123

  Fly   122 CKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYAR----PGGQSIKDT--- 179
            .:|:|. |.|.:.|:.||...:..:::.||.|.:.|.|..:.:.||:||    |..:|..|.
plant   124 VEIIRQ-KDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSP 187

  Fly   180 -------NLYVINLSRNINDDMLDRIF--SPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQE 235
                   .|||.||:.......|..:|  :.:..:..|.:..|. .||..|..||.:..||||:.
plant   188 APGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADP-EGRSSGYGFVSFATREEAEN 251

  Fly   236 AIKALNNTVPEGGSQPIWVRLA------EEHGKAKAAQFMAQIG 273
            ||..||.....|  :||.::.:      .|.|.:..|...::.|
plant   252 AITKLNGKEIMG--RPITLKFSLRSASESEDGDSVEANNASEDG 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	26/83 (31%)
		RRM_SF	179..257	CDD:302621	25/89 (28%)
AT2G35410	NP_181084.1	PABP-1234	97..>279	CDD:130689	53/185 (29%)
		RRM_SF	97..168	CDD:409669	21/71 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm1072
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920