Protein Alignment ssx and rbm46

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001072501.1
• Gene: rbm46 / 779956
• XenbaseID: XB-GENE-1011216
• Length: 534
• Species: Xenopus tropicalis
• Alignment Length: 274
• Identity: 54/274 - (19%)
• Similarity: 97/274 - (35%)
• Gaps: 106/274 - (38%)

  Fly    95 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYV 159
            :.:..:|:||.:.:|..||:..|.|...::|.:| :|.:.||.||.|..:.::..||:.||.:.:
 Frog    63 VFVGKIPRDMYEDKLVPLFARAGKIYEFRLMMEF-SGENRGYAFVMYTNKEEALLAIRMLNNYEI 126

  Fly   160 -----------------------RNKR-------------------------------------- 163
                                   :.||
 Frog   127 CQGKFIGVCVSLDNCRLFIGSIPQEKRKEEILEEMKKVTEGVMDVIVYPSATDKTKNRGFAFVMY 191

  Fly   164 ------------------------LKVSYARPGGQSIKDTN-----LYVINLSRNINDDMLDRIF 199
                                    :||::|.|..:..::|.     |||.||..:..::.:...|
 Frog   192 ESHRAAAMARRKLIPGPFQLWGHTIKVAWASPEKEVDEETMQKVKVLYVRNLMMSTTEETIKAEF 256

  Fly   200 SPY--GLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGK 262
            :.|  |::.:...:||        .|||.:.:|:.|..|:..:|..:.:|..  |.|.||:...|
 Frog   257 NRYKPGVVERVKKIRD--------YAFVHFFRRDYAIAAMSVMNGRLIDGAR--IEVTLAKPVNK 311

  Fly   263 AKAAQFMAQIGGGN 276
            ..|   ..|.|.|:
 Frog   312 EAA---WRQNGNGH 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	26/162 (16%)
		RRM_SF	179..257	CDD:302621	21/84 (25%)
rbm46	NP_001072501.1	hnRNP-R-Q	20..495	CDD:273732	54/274 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910