Protein Alignment ssx and Hnrnpa0

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_084148.1
• Gene: Hnrnpa0 / 77134
• MGIID: 1924384
• Length: 305
• Species: Mus musculus
• Alignment Length: 387
• Identity: 86/387 - (22%)
• Similarity: 129/387 - (33%)
• Gaps: 148/387 - (38%)

  Fly    87 VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAI 151
            ::.:....|.|..|....::..|...|...|.:..|.::.:.:|..|..:|||.|....:::.|:
Mouse     1 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAM 65

  Fly   152 ----QKLNGFYVRNKRL--KVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNI 210
                ..::|..|..||.  :...||||..: |...|:|..|..::.:..|...||.:|.:.:..|
Mouse    66 AASPHAVDGNTVELKRAVSREDSARPGAHA-KVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEI 129

  Fly   211 LRDKLTGRPRGVAFVRYNKREEAQEA--IK---------ALNNTVPE-----GGSQPIWVRLAEE 259
            :.||.:|:.||..||.:...:.|.:|  :|         .:...||:     ||
Mouse   130 IADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIHAGG----------- 183

  Fly   260 HGKAKAAQFMAQIGGGNGGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQH 324
             |.|:||:  ...|||.|.||||    |.||
Mouse   184 -GGARAAR--GGRGGGRGRGGGG----GGGG---------------------------------- 207

  Fly   325 PQHHPQLHHMQHHHPNNHNNNHPNNHHHNNNNNNHHNMGGPHPHHMQQMHPMGMNMGMGVNMGMG 389
                                         .:.|.....||              ..|.|.|...|
Mouse   208 -----------------------------RDQNGLAKGGG--------------GGGGGYNSYGG 229

  Fly   390 MGMGMPIHGGGGGGGG-----------------------------GGGGGGGGNFHHMAHRG 422
            .| |...:||||||||                             ||||||||::...::.|
Mouse   230 YG-GYGAYGGGGGGGGSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSWGGRSNSG 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	21/85 (25%)
		RRM_SF	179..257	CDD:302621	22/93 (24%)
Hnrnpa0	NP_084148.1	RRM1_hnRNPA0	5..83	CDD:409764	18/77 (23%)
		RRM_SF	99..178	CDD:418427	20/78 (26%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..211		17/113 (15%)
		HnRNPA1	253..>272	CDD:402981	0/18 (0%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	265..305		9/26 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010