Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001315077.1 | Gene: | hnrnpa3 / 751729 | ZFINID: | ZDB-GENE-060224-1 | Length: | 340 | Species: | Danio rerio |
Alignment Length: | 393 | Identity: | 89/393 - (22%) |
---|---|---|---|
Similarity: | 134/393 - (34%) | Gaps: | 139/393 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 72 EGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGY 136
Fly 137 GFVDYKTESDSEDAI----QKLNGFYVRNKRL--KVSYARPGGQ-SIKDTNLYVINLSRNINDDM 194
Fly 195 LDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVR--LA 257
Fly 258 EEHGKAKAAQFMAQIGGGN--------------GGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHN 308
Fly 309 PHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNNNNNNHHNMGGPHPHHMQQM 373
Fly 374 HPMGMNMGMGVNMGMGMGMGMPIHGGGGG-----------------GGGGG--GGGGGGNFHHMA 419
Fly 420 HRG 422 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 25/85 (29%) |
RRM_SF | 179..257 | CDD:302621 | 16/79 (20%) | ||
hnrnpa3 | NP_001315077.1 | RRM1_hnRNPA_like | 14..91 | CDD:241022 | 24/76 (32%) |
RRM2_hnRNPA3 | 104..183 | CDD:241026 | 18/83 (22%) | ||
HnRNPA1 | <296..>315 | CDD:288479 | 1/2 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |