Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006539285.1 | Gene: | Hnrnpr / 74326 | MGIID: | 1891692 | Length: | 635 | Species: | Mus musculus |
Alignment Length: | 443 | Identity: | 76/443 - (17%) |
---|---|---|---|
Similarity: | 140/443 - (31%) | Gaps: | 158/443 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGF 157
Fly 158 YVR------------NKRLKVS------------------------------YARPGGQS----- 175
Fly 176 ----------------------------------------------IKDTNLYVINLSRNINDDM 194
Fly 195 LDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEE 259
Fly 260 HGKAKAAQFMAQIGG---------------------GNGGGGGGPPHMGPGGPMHPPHHHNNHHH 303
Fly 304 NNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNNNNNNHHNMGGPHPH 368
Fly 369 HMQQMHPMGMNMG-------MGVNMGMGMGMGMPIHGGGGGGGGGGGGGGGGN 414 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 24/121 (20%) |
RRM_SF | 179..257 | CDD:302621 | 20/77 (26%) | ||
Hnrnpr | XP_006539285.1 | hnRNP_Q_AcD | 37..106 | CDD:375786 | |
hnRNP-R-Q | 106..630 | CDD:273732 | 76/443 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |