Protein Alignment ssx and hnrnpab

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: XP_012814656.1
• Gene: hnrnpab / 734098
• XenbaseID: XB-GENE-6042555
• Length: 326
• Species: Xenopus tropicalis
• Alignment Length: 429
• Identity: 83/429 - (19%)
• Similarity: 133/429 - (31%)
• Gaps: 146/429 - (34%)

  Fly     1 MSNADKMQDQEHDDE---QSSDIEGSGDNV-GRDDGTDDDDDSNGNMQQENGDGGNGGDGQEHSG 61
            ||:.::.|..|...|   ::.|.|.:...| |..:|.:             ||..|...|:|.:|
 Frog     1 MSDTEQQQYMETGTENGHEACDAEAAESKVPGGQNGAE-------------GDQINASKGEEDAG 52

  Fly    62 DEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMR 126
            ......|...||                   ..:.:..|..|.:.::|.:.||..|.::.|.|..
 Frog    53 CVPDISSPLTEG-------------------VKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKM 98

  Fly   127 DFKTGYSFGYGFVDYKTESDSEDAIQ----KLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLS 187
            |..||.|.|:||:.:|..:..:..::    :|:|..:..|:.......|    ||  .::|..|:
 Frog    99 DPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAMKKDP----IK--KIFVGGLN 157

  Fly   188 RNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAI-KALNNTVPEGGSQP 251
            ....:|.:...|..:|.|....:..|..|.:.||..|:.:.:.|..::.: |..:|.  .|....
 Frog   158 PEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNV--SGSKCE 220

  Fly   252 IWVRLAEEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHMPPHHH 316
            |.:        |:..:...|..||.||..||  ..|.||
 Frog   221 IKI--------AQPKEVYQQQYGGRGGSFGG--RGGRGG-------------------------- 249

  Fly   317 QPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNNNNNNHHNMGGPHPHHMQQMHPMGMNMG 381
                                                                     ...|.|..
 Frog   250 ---------------------------------------------------------KAQGQNWN 257

  Fly   382 MGVNMGMGMGMGMPIHGGGGGGGGGGGGGGGGNFHHMAH 420
            .|.|.....|.|    ..|.||.|..|.||.||:.:..:
 Frog   258 QGYNSYWNQGYG----NQGYGGYGQQGYGGYGNYDYSGY 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	20/83 (24%)
		RRM_SF	179..257	CDD:302621	16/78 (21%)
hnrnpab	XP_012814656.1	CBFNT	1..52	CDD:311868	15/63 (24%)
		RRM1_hnRNPAB	66..140	CDD:241201	19/73 (26%)
		RRM2_hnRNPAB	145..224	CDD:241028	19/94 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010