DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and cirbpb

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_001035411.2	Gene:	cirbpb / 678563	ZFINID:	ZDB-GENE-030131-5841	Length:	206	Species:	Danio rerio

Alignment Length:	256	Identity:	58/256 - (22%)
Similarity:	93/256 - (36%)	Gaps:	90/256 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly   181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVP 245
            |::..||.:..:..|:..||.||.|.:.:::||:.|.|.||..||.:...|:|::|:.|:|....
Zfish     7 LFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGKQV 71

  Fly   246 EGGSQPIWVRLAEEHGKA--KAAQFMAQIGGGNGGGGG---GPPHMGPGGPMHPPHHHNNHHHNN 305
            :|.    .:|: :|.||:  ::..|.   ||..|||.|   |....|.||
Zfish    72 DGR----MIRV-DEAGKSGGRSGGFR---GGSRGGGRGFFRGSRGRGGGG--------------- 113

  Fly   306 HHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNNNNNNHHNMGGPHPHHM 370
                                                        :..:.:..:..:.||...:..
Zfish   114 --------------------------------------------YGGDRSYGSDRSFGGDRSYGG 134

  Fly   371 QQMHPMGMNMGMGVNMGMGMGMGMPIHGGG----GGGGGG-----GGGGGGGNFHHMAHRG 422
            .:.:..|         ..|.|.|...:|||    ||||||     ||...||.:....::|
Zfish   135 DRSYGGG---------DRGYGGGERSYGGGDRSYGGGGGGYSNRSGGYSSGGGYRDNRNQG 186

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	24/75 (32%)
cirbpb	NP_001035411.2	RRM	<2..>81	CDD:223796	24/78 (31%)
cirbpb	NP_001035411.2	RRM_SF	5..83	CDD:302621	25/80 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910