DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and Rbms2

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_062685.2	Gene:	Rbms2 / 56516	MGIID:	1861776	Length:	383	Species:	Mus musculus

Alignment Length:	374	Identity:	91/374 - (24%)
Similarity:	136/374 - (36%)	Gaps:	86/374 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    42 NMQQENGDGGNGGDGQEHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTD 106
            |....:..||.||.|                ||             |:.|.|||.|..|....||
Mouse    36 NSTPNSSGGGGGGSG----------------GN-------------DQLSKTNLYIRGLQPGTTD 71

  Fly   107 RELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYARP 171
            ::|..|....|.|.:.|.:.|..|....||||||:.:.|.::.|:..|....|:.:..|.....|
Mouse    72 QDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTALKASGVQAQMAKQQEQDP 136

  Fly   172 GGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEA 236
                   ||||:.||..::::..|:.:..|:|.::...|||| .:|..|||.|.|....|:.:..
Mouse   137 -------TNLYISNLPLSMDEQELEGMLKPFGQVISTRILRD-TSGASRGVGFARMESTEKCEAI 193

  Fly   237 IKALNN---TVPEG---GSQPIWVRLAEEHGKAKAAQFMAQIGG----GNGGGGG-----GPPHM 286
            |...|.   ..|.|   .|.|:..:.|:...|.:.:|......|    .||..||     .|...
Mouse   194 ITHFNGKYIKTPPGVAAPSDPLLCKFADGGPKKRQSQGRYVQNGRAWPRNGDMGGMALTYDPTAA 258

  Fly   287 GPGGPMHPPHH--HNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNN 349
            ...|....|:.  |:.....:...|::|    .|...:|.....|.:.|.....|
Mouse   259 LQNGFYAAPYSIAHSRMLAQSALAPYLP----SPVSSYQGSVLTPGMDHPLSLQP---------- 309

  Fly   350 HHHNNNNNNHHNMGGPHPHHMQQMHPMGMNMGMGVNMGMGMGMGMPIHG 398
                      .:|.||   ..||:..:.:|     ::|..|.....:||
Mouse   310 ----------ASMMGP---LTQQLGHLSLN-----SLGTFMPAAAAMHG 340

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	26/79 (33%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	26/83 (31%)
Rbms2	NP_062685.2	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	28..56		9/48 (19%)
		RRM_SF	53..136	CDD:388407	27/82 (33%)
		RRM2_MSSP2	137..222	CDD:240918	27/85 (32%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	352..383
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910