DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and hnrnpa2b1

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_001192271.1	Gene:	hnrnpa2b1 / 549680	XenbaseID:	XB-GENE-490993	Length:	350	Species:	Xenopus tropicalis

Alignment Length:	340	Identity:	85/340 - (25%)
Similarity:	127/340 - (37%)	Gaps:	83/340 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    95 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKT--ESDSEDAIQ--KLN 155
            |.|..|..:.|:..|.|.:...|.:..|.:|||..:..|.|:|||.:.:  |.|:..|.:  .::
Frog    11 LFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMAARPHTID 75

  Fly   156 GFYVRNKR--LKVSYARPGGQ-SIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTG 217
            |..|..||  .:...|:||.. ::|  .|:|..:..:..:..|...|..||.|....|:.||.:|
Frog    76 GRVVEPKRAVAREESAKPGAHVTVK--KLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSG 138

  Fly   218 RPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGG---- 278
            :.||..||.::..:...:.:....:|:....::   ||.|....:.:..|......|||.|
Frog   139 KKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE---VRKALSKQEMQDVQNTRNSRGGNFGFGDS 200

  Fly   279 GGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNHN 343
            .|||....||||                                                  |..
Frog   201 RGGGNFGSGPGG--------------------------------------------------NFR 215

  Fly   344 NNHPNNHHHNNNNNNHHNMGGPHPHHMQQMHPMGMNMGMGVNMGMGMG--MGMPIHG--GGGGGG 404
            .:...........:.::..||..         .|.:.|.|...|.|.|  .|.|.:|  ||||||
Frog   216 GSSDGYGGGRGYGDGYNGYGGGQ---------SGGSFGGGPGYGGGRGGYGGSPGYGNQGGGGGG 271

  Fly   405 GGGGGG----GGGNF 415
            ||.|||    ||||:
Frog   272 GGYGGGYDNYGGGNY 286

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	25/83 (30%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	18/77 (23%)
hnrnpa2b1	NP_001192271.1	RRM1_hnRNPA2B1	7..87	CDD:241206	23/75 (31%)
		RRM2_hnRNPA2B1	100..179	CDD:241025	20/83 (24%)
		HnRNPA1	294..319	CDD:288479
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010