Protein Alignment ssx and Hrb87F

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Alignment Length: 440
• Identity: 112/440 - (25%)
• Similarity: 158/440 - (35%)
• Gaps: 124/440 - (28%)

  Fly    43 MQQENGDGGNGGDGQEHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDR 107
            |.::|...||..||:|.:                   :.:|:::        |.|..|....||.
  Fly     1 MAEQNDSNGNYDDGEEIT-------------------EPEQLRK--------LFIGGLDYRTTDD 38

  Fly   108 ELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ-----KLNGFYVRNKRLKVS 167
            .|...|...|.|....:|:|.||..|.|:||:.| ::|...|..|     |::|..|..||
  Fly    39 GLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY-SQSYMIDNAQNARPHKIDGRTVEPKR---- 98

  Fly   168 YARP--------GGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAF 224
             |.|        .|.::|  .|:|..|..:.:::.|...|..:|.||..||:.||.||:.||.||
  Fly    99 -AVPRQEIDSPNAGATVK--KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160

  Fly   225 VRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPG 289
            :.::..:...:.|....:::.   ::.:.|:      ||.|.|.|.:.||  |||.|||...|.|
  Fly   161 IEFDDYDPVDKIILQKTHSIK---NKTLDVK------KAIAKQDMDRQGG--GGGRGGPRAGGRG 214

  Fly   290 GPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNN 354
            |..............|..|                             ...|...........|:
  Fly   215 GQGDRGQGGGGWGGQNRQN-----------------------------GGGNWGGAGGGGGFGNS 250

  Fly   355 NNNNHHNMGGPHPHHMQQMHPMG---MNMGMGVNMGMGMGMGMPIHGG------GGGGGGGGGGG 410
            ..|.....||......||....|   .|.| |.|.|...|.|....||      ||.||||||||
  Fly   251 GGNFGGGQGGGSGGWNQQGGSGGGPWNNQG-GGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGG 314

  Fly   411 GGGNFHHMAHRGEVFMLPLPICSRFPSQPHPVGNGICHSPNKNSRFRLSR 460
            |.||.:..::.|                          .|.:||.|..:|
  Fly   315 GFGNEYQQSYGG--------------------------GPQRNSNFGNNR 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	28/92 (30%)
		RRM_SF	179..257	CDD:302621	20/77 (26%)
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	27/90 (30%)
		RRM_SF	116..188	CDD:302621	19/74 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.010