DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and elavl2

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_001002172.2	Gene:	elavl2 / 431719	ZFINID:	ZDB-GENE-040704-9	Length:	389	Species:	Danio rerio

Alignment Length:	197	Identity:	86/197 - (43%)
Similarity:	122/197 - (61%)	Gaps:	0/197 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    76 NSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVD 140
            |:.....:|......|.||||:|||||:||..||.:||...|.|.:||::||..||.|.|||||:
Zfish    51 NTCTSPVEMPNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVN 115

  Fly   141 YKTESDSEDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLI 205
            |....|:|.||..|||..::.|.:|||||||...||:|.||||..|.:.:....|:::||.:|.|
Zfish   116 YMEPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRI 180

  Fly   206 VQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMA 270
            :...||.|::||..|||.|:|:::|.||:||||.||...|.|.::||.|:.|....:..:...::
Zfish   181 ITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNPSQKSSQALLS 245

  Fly   271 QI 272
            .:
Zfish   246 HL 247

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	45/79 (57%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	34/77 (44%)
elavl2	NP_001002172.2	ELAV_HUD_SF	65..388	CDD:273741	84/183 (46%)
		RRM1_Hu	67..144	CDD:241094	41/76 (54%)
		RRM2_HuB	149..238	CDD:241219	38/88 (43%)
		RRM_SF	303..388	CDD:302621
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910