Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
Alignment Length: | 410 | Identity: | 79/410 - (19%) |
---|---|---|---|
Similarity: | 150/410 - (36%) | Gaps: | 107/410 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 70 DNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSF 134
Fly 135 GYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYARP-------GGQS------------IKDTN 180
Fly 181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVP 245
Fly 246 EGGSQPIWV--RLAEEHGKAKAA--QFMAQIGGGNGGGGGGPPHMGPGGPMHPPHHHNNHHHNN- 305
Fly 306 HHNPH-----MPP--------HHHQPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNNNNN 357
Fly 358 NHHNMG---------------GP---HPH-----------HMQQMHPMGMN--MGMGVN------ 385
Fly 386 MGMGMGMGMPIHGGGGGGGG 405 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 21/86 (24%) |
RRM_SF | 179..257 | CDD:302621 | 14/79 (18%) | ||
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | 20/82 (24%) |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 16/81 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |