DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and rbm14b

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	XP_021333123.1	Gene:	rbm14b / 402858	ZFINID:	ZDB-GENE-040426-2455	Length:	560	Species:	Danio rerio

Alignment Length:	172	Identity:	50/172 - (29%)
Similarity:	87/172 - (50%)	Gaps:	20/172 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    87 VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAI 151
            :|:.....|.:..|..|.|..||..:|...|.:.:|.::|.|        .||..:.|..:|.||
Zfish     1 MDKGHTVKLFVGNLALDTTQEELSAIFESYGQVVSCSVLRQF--------AFVHLQGEGAAERAI 57

  Fly   152 QKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLT 216
            ::|||...:.:.|.|..:|  |:.:..|.::|.|||.....:.|..:|..:|.:::    .||:
Zfish    58 RELNGREFKGRNLVVEESR--GRPLHSTKVFVGNLSSMCTTEDLQELFQTFGKVLE----CDKV- 115

  Fly   217 GRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAE 258
               :|.|||....:|:|.:||:||:.|..:|  :|:.|.|::
Zfish   116 ---KGYAFVHMENKEDALQAIEALHGTSFKG--RPLSVELSK 152

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	23/79 (29%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	24/77 (31%)
rbm14b	XP_021333123.1	RRM1_CoAA	7..75	CDD:241052	22/75 (29%)
		RRM1_2_CoAA_like	84..149	CDD:240789	22/74 (30%)
		AIR1	<150..>187	CDD:331526	1/3 (33%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910