Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_611955.2 | Gene: | CG4806 / 37948 | FlyBaseID: | FBgn0260456 | Length: | 657 | Species: | Drosophila melanogaster |
Alignment Length: | 335 | Identity: | 65/335 - (19%) |
---|---|---|---|
Similarity: | 122/335 - (36%) | Gaps: | 93/335 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 KMQDQEHDDEQSSDIEGSGDNVGRDDGTDDDDDSNGNMQQENGDGGN--GGDGQEHSGD-EEQHH 67
Fly 68 SQDNEGNDNSAGQQQQMQQVDR--------TSATNLIINYLPQDMTDRELYNLFSGCGPINTCKI 124
Fly 125 MRDFKTGYSFGYGFVDYKT--------------------------------------ESDSEDAI 151
Fly 152 QKLNGFYVRN-------------------KRLKVSYARPGGQSIKDTNLYVI-------NLSRNI 190
Fly 191 NDDMLDRI------FSPYGLIVQRNILRDKLT-----GRPRGVAFVRYNKREEAQEAIKALNNTV 244
Fly 245 PEGGSQ--PI 252 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 21/136 (15%) |
RRM_SF | 179..257 | CDD:302621 | 24/94 (26%) | ||
CG4806 | NP_611955.2 | RRM | <2..>154 | CDD:223796 | 6/21 (29%) |
RRM_SF | 49..124 | CDD:302621 | |||
RRM3_RBM28_like | 230..306 | CDD:240861 | 14/75 (19%) | ||
RRM4_RBM28_like | 379..468 | CDD:240862 | 22/86 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24012 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |