Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956398.1 | Gene: | hnrnpa1b / 378453 | ZFINID: | ZDB-GENE-030912-14 | Length: | 422 | Species: | Danio rerio |
Alignment Length: | 398 | Identity: | 104/398 - (26%) |
---|---|---|---|
Similarity: | 148/398 - (37%) | Gaps: | 103/398 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 GNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYG 137
Fly 138 FVDYKTESD---SEDA-IQKLNGFYVRNKRL--KVSYARP-GGQSIKDTNLYVINLSRNINDDML 195
Fly 196 DRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEH 260
Fly 261 GKAKAAQFMAQIGGGNGGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQHP 325
Fly 326 QHHPQLHHMQHHHPNNHNNNHPNNHHHNN-----------------NNNNHHNMGG--------- 364
Fly 365 --PHPHHMQQMHPMGMNMGMGV-NMGMGMGMGMPIHGGGG----------------GGGGGGGG- 409
Fly 410 -GGGGNFH 416 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 27/86 (31%) |
RRM_SF | 179..257 | CDD:302621 | 18/77 (23%) | ||
hnrnpa1b | NP_956398.1 | RRM | <19..187 | CDD:223796 | 45/174 (26%) |
RRM_SF | 31..111 | CDD:302621 | 27/84 (32%) | ||
RRM2_hnRNPA1 | 124..200 | CDD:241024 | 20/86 (23%) | ||
HnRNPA1 | 367..>387 | CDD:288479 | 104/398 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |