Protein Alignment ssx and Syncrip

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001382580.1
• Gene: Syncrip / 363113
• RGDID: 1305683
• Length: 623
• Species: Rattus norvegicus
• Alignment Length: 448
• Identity: 85/448 - (18%)
• Similarity: 156/448 - (34%)
• Gaps: 154/448 - (34%)

  Fly    78 AGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYK 142
            :|||..:       .|.:.:..:|:|:.:.||..||...|||...::|.|..||.:.||.||.:.
  Rat   154 SGQQPSV-------GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFC 211

  Fly   143 TESDSEDAIQKLNGFYVR------------NKRLKVS---------------------------Y 168
            |:..:::|::..|...:|            |.||.|.                           |
  Rat   212 TKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILY 276

  Fly   169 ARPGGQS------------------------------------------IKDTN---------LY 182
            .:|..:.                                          |:|.:         |:
  Rat   277 HQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLF 341

  Fly   183 VINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEG 247
            |.||:..:.:::|::.||.:|.:.:...|:|        .||:.:::|:.|.:|::.:|....||
  Rat   342 VRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEMNGKDLEG 398

  Fly   248 GS-QPIWVRLAEEHGKAKAAQFMAQIGGGNGGGGG----GPPHMGP----------GGPMHPPHH 297
            .: :.::.:..::..|.:.||..|   ..|.....    |||||.|          ||..:||.:
  Rat   399 ENIEIVFAKPPDQKRKERKAQRQA---AKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDY 460

  Fly   298 HNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHM----------QHHHPNNHNNNHPNNHHH 352
            :....:.:::.    ..:|..:..::.|.:..:...:          :...|:......|
  Rat   461 YGYEDYYDYYG----YDYHNYRGGYEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAP----- 516

  Fly   353 NNNNNNHHNMGGPHPHHMQQMHPMGMNMGM-GVNMGMGMGMGMPIHGGGGGGGGGGGG 409
            ......:...|||           |...|: |...|.....|..:.|..||.||..||
  Rat   517 PRGRAGYSQRGGP-----------GSARGVRGARGGAQQQRGRGVRGARGGRGGNVGG 563

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	28/118 (24%)
		RRM_SF	179..257	CDD:302621	18/87 (21%)
Syncrip	NP_001382580.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910