DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and bru1

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_001260403.1	Gene:	bru1 / 34648	FlyBaseID:	FBgn0000114	Length:	810	Species:	Drosophila melanogaster

Alignment Length:	295	Identity:	66/295 - (22%)
Similarity:	126/295 - (42%)	Gaps:	42/295 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 HDDEQSSDIEGSGDNVGRDDGTDDDDDSN-GNMQQENGDGGNGGDGQEHSGDEEQHHSQD--NEG 73
            |.:..:..:..:.:|  ..:||..::..| ||.......||:..:.....|......:..  |..
  Fly   255 HSNNNNPSLLNNNNN--NSNGTSSNNSLNVGNNNSNPSLGGSNSNALVSVGSNGIMSAAGLVNNN 317

  Fly    74 NDNSAGQQQQMQQVD-------RTSAT-------------NLIINYLPQDMTDRELYNLFSGCGP 118
            |:..:..:..:..||       .|.||             .:.:..:|:.|.:.:|..:|...|.
  Fly   318 NNPCSANRNVVAMVDDDACFRLDTDATVTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGA 382

  Fly   119 INTCKIMRDFKTGYSFGYGFVDYKTES---DSEDA---IQKLNGFYVRNKRLKVSYARPGGQSIK 177
            :::..::||..||.|.|..||.:.|..   .::||   ::.|||.|     ..:.......::..
  Fly   383 VHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKTLNGMY-----HPIQMKPADSENRN 442

  Fly   178 DTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKAL-- 240
            :..|:|..|::.:|::.:.::|..:|.|.:..:|||: .|:.:|.|||.:..:..|..|||..
  Fly   443 ERKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQ-NGQSKGCAFVTFATKHAAISAIKVTLS 506

  Fly   241 NNTVPEGGSQPIWVRLAE---EHGKAKAAQFMAQI 272
            .|.:.||.:.|:.|:.|:   |..:.|..|..|.:
  Fly   507 QNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANL 541

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	21/98 (21%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	24/79 (30%)
bru1	NP_001260403.1	RRM1_CELF1_2_Bruno	356..437	CDD:241075	20/85 (24%)
		ELAV_HUD_SF	359..808	CDD:273741	49/189 (26%)
		RRM2_Bruno_like	443..524	CDD:241080	24/81 (30%)
		RRM3_Bruno_like	722..800	CDD:241084
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24012
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010