Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956133.1 | Gene: | pabpc1l / 327625 | ZFINID: | ZDB-GENE-030131-5836 | Length: | 620 | Species: | Danio rerio |
Alignment Length: | 211 | Identity: | 59/211 - (27%) |
---|---|---|---|
Similarity: | 101/211 - (47%) | Gaps: | 23/211 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 GNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYG 137
Fly 138 FVDYKTESDSEDAIQKLNGFYVRNKRLKVSYA-----RPGG-------------QSIKDTNLYVI 184
Fly 185 NLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGS 249
Fly 250 QPIWVRLAEEHGKAKA 265 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 24/84 (29%) |
RRM_SF | 179..257 | CDD:302621 | 27/77 (35%) | ||
pabpc1l | NP_956133.1 | PABP-1234 | 11..610 | CDD:130689 | 59/211 (28%) |
RRM1_I_PABPs | 12..91 | CDD:240824 |