Protein Alignment ssx and syncripl

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_955973.1
• Gene: syncripl / 324384
• ZFINID: ZDB-GENE-030131-3104
• Length: 560
• Species: Danio rerio
• Alignment Length: 526
• Identity: 95/526 - (18%)
• Similarity: 162/526 - (30%)
• Gaps: 219/526 - (41%)

  Fly    32 GTDDDDDSNG---------------NMQQENGDGGNGG--DGQEHSGDEEQHHSQDNEGNDNSAG 79
            ||...|.:.|               .:....|....||  .|..|:|
Zfish   110 GTKVSDSTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPGSTHAG------------------ 156

  Fly    80 QQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTE 144
                   |..|..|.:.:..:|:|:.:.||..||...|||...::|.|..:|.:.||.||.:.|:
Zfish   157 -------VQPTIGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLSGLNRGYAFVTFCTK 214

  Fly   145 SDSEDAIQKLNGFYVR------------NKRLKVS---------------------------YAR 170
            ..::.|::..|...:|            |.||.|.                           |.:
Zfish   215 EAAQKAVKLCNNNEIRPGKHIGVCISVANNRLFVGSIPKSKTKDQIVEEFAKVTEGLNDVILYHQ 279

  Fly   171 PGGQS------------------------------------------IKDTN---------LYVI 184
            |..:.                                          |:|.:         |:|.
Zfish   280 PDDKKKNRGFCFLGYEDHKTAAQARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVR 344

  Fly   185 NLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGS 249
            ||:..:.:::|::.|..:|.:.:...|:|        .||:.:.:|:.|.:|:..|:....||
Zfish   345 NLASTVTEELLEKTFCQFGKLERVKKLKD--------YAFIHFEERDGAVKALAELHGKDLEG-- 399

  Fly   250 QPIWVRLA---EEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHM 311
            :||.:..|   ::..|.:.||..|                 ....|:..:::           :.
Zfish   400 EPIEIVFAKPPDQKRKERKAQRQA-----------------AKTQMYDEYYY-----------YG 436

  Fly   312 PPHHHQP-----------QHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNNNNNNHHNMGGP 365
            |||.|||           .:||.:                     :....::|....::||..|.
Zfish   437 PPHVHQPTRARGRGARGYSYPHDY---------------------YSYEDYYNYYGYDYHNYRGG 480

  Fly   366 H--PHHMQ---QMHPMGM-NMGMGVNMGMGMGMGMPIHGG-------GGGGGGGGGGGGGGNFHH 417
            :  |::..   |.|..|. |.|:.|.. :..|.|..:..|       |..|...||.|..|....
Zfish   481 YDDPYYGYDDFQAHVRGRGNRGVRVPT-LSRGRGSSVSRGRAAFCQRGAPGSSRGGRGSRGGLQQ 544

  Fly   418 MAHRGE 423
            ....|:
Zfish   545 RCRVGK 550

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	27/118 (23%)
		RRM_SF	179..257	CDD:302621	19/86 (22%)
syncripl	NP_955973.1	RRM1_hnRNPQ	162..240	CDD:240927	21/77 (27%)
		RRM_SF	242..326	CDD:302621	6/83 (7%)
		RRM3_hnRNPR	338..409	CDD:240938	20/80 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910