Protein Alignment ssx and HNRNPAB

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_112556.2
• Gene: HNRNPAB / 3182
• HGNCID: 5034
• Length: 332
• Species: Homo sapiens
• Alignment Length: 363
• Identity: 74/363 - (20%)
• Similarity: 134/363 - (36%)
• Gaps: 56/363 - (15%)

  Fly    11 EHDDEQSSDIEGSGDNVGRDDGTDDDDDSNGNMQQENGDGGNGGDGQEHSGDEEQHHSQDNEGND 75
            |..:||..:..|:.:| |.:...:.:..:..      |.|...|.|...:...        .||.
Human     3 EAGEEQPMETTGATEN-GHEAVPEGESPAGA------GTGAAAGAGGATAAPP--------SGNQ 52

  Fly    76 NSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVD 140
            |.|...|.....:...|..:.:..|..|.:.::|.:.|:..|.:..|.|..|..||.|.|:||:.
Human    53 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117

  Fly   141 YKTESDSEDAI----QKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSP 201
            :|..:..|..:    .:|:|..:..|:.......|    :|  .::|..|:....::.:...|..
Human   118 FKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDP----VK--KIFVGGLNPEATEEKIREYFGE 176

  Fly   202 YGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGS-------QPIWVRLAEE 259
            :|.|....:..|....:.||..|:.:.:.|..::.::...:||  .||       ||..|...::
Human   177 FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTV--SGSKCEIKVAQPKEVYQQQQ 239

  Fly   260 HGK-AKAAQFMAQIGGGNGGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNP-------HMPPHHH 316
            :|. .:..:.....|.|.||||||.....            |..:.|:.|.       :.|.:..
Human   240 YGSGGRGNRNRGNRGSGGGGGGGGQSQSW------------NQGYGNYWNQGYGYQQGYGPGYGG 292

  Fly   317 QPQHPHQHPQHHPQLHHMQHHHPNNHNNNHPNNHHHNN 354
            ....|:.:..:.|...:.|  ...|:..:.....|.||
Human   293 YDYSPYGYYGYGPGYDYSQ--GSTNYGKSQRRGGHQNN 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	20/83 (24%)
		RRM_SF	179..257	CDD:302621	17/84 (20%)
HNRNPAB	NP_112556.2	CBFNT	1..70	CDD:311868	15/81 (19%)
		RRM1_hnRNPAB	66..145	CDD:410151	20/78 (26%)
		RRM2_hnRNPAB	150..229	CDD:409997	16/86 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.920