Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036356.1 | Gene: | bru2 / 250811 | FlyBaseID: | FBgn0262475 | Length: | 893 | Species: | Drosophila melanogaster |
Alignment Length: | 480 | Identity: | 101/480 - (21%) |
---|---|---|---|
Similarity: | 162/480 - (33%) | Gaps: | 108/480 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 88 DRTSATN--LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTES---DS 147
Fly 148 EDA---IQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRN 209
Fly 210 ILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNT-VPEGGSQPIWVRLAEEHGKAKAAQFMAQI- 272
Fly 273 --------GGGNGGGG-----------GGPPHMG------------------PGGPMHPPHHHNN 300
Fly 301 HHHNNHHNPHMPPHHHQPQHPHQ-----------------HPQHHPQLH----HMQHHHPNNHNN 344
Fly 345 NHPNNHHHNNNNNNHHNMGGPHPHHMQQMHPMGMNMGMGVNMGMGMGMGMPIHGGGG-------- 401
Fly 402 GGGGGGGGGGGGNFHHMAHRGEVFMLPLPICSR-------FPSQPHPVGNGICHSPNKNSRFRLS 459
Fly 460 RRPQASRTTIRYIAHSVADPVPTPT 484 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 21/87 (24%) |
RRM_SF | 179..257 | CDD:302621 | 25/78 (32%) | ||
bru2 | NP_001036356.1 | RRM1_CELF1_2_Bruno | 294..375 | CDD:241075 | 21/85 (25%) |
RRM2_Bruno_like | 381..461 | CDD:241080 | 25/80 (31%) | ||
RRM_SF | 801..892 | CDD:302621 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |