Protein Alignment ssx and ELAVL1

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001410.2
• Gene: ELAVL1 / 1994
• HGNCID: 3312
• Length: 326
• Species: Homo sapiens
• Alignment Length: 226
• Identity: 92/226 - (40%)
• Similarity: 130/226 - (57%)
• Gaps: 15/226 - (6%)

  Fly    60 SGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKI 124
            |...|.|.::|..|:               ...||||:|||||:||..||.:|||..|.:.:.|:
Human     2 SNGYEDHMAEDCRGD---------------IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKL 51

  Fly   125 MRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRN 189
            :||...|:|.|||||:|.|..|:|.||..|||..:::|.:|||||||..:.|||.|||:..|.|.
Human    52 IRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRT 116

  Fly   190 INDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWV 254
            :....::.:||.:|.|:...:|.|:.||..|||||:|::||.||:|||.:.|...|.|.|:||.|
Human   117 MTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITV 181

  Fly   255 RLAEEHGKAKAAQFMAQIGGGNGGGGGGPPH 285
            :.|....:.|....::|:........|||.|
Human   182 KFAANPNQNKNVALLSQLYHSPARRFGGPVH 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	44/79 (56%)
		RRM_SF	179..257	CDD:302621	33/77 (43%)
ELAVL1	NP_001410.2	ELAV_HUD_SF	19..326	CDD:273741	87/194 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.910