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Protein Alignment ssx and ELAVL2
DIOPT Version :9
Sequence 1: | NP_569908.1 |
Gene: | ssx / 31086 |
FlyBaseID: | FBgn0024987 |
Length: | 485 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011516080.2 |
Gene: | ELAVL2 / 1993 |
HGNCID: | 3313 |
Length: | 392 |
Species: | Homo sapiens |
Alignment Length: | 182 |
Identity: | 87/182 - (47%) |
Similarity: | 118/182 - (64%) |
Gaps: | 0/182 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLN 155
|.||||:|||||:||..||.:||...|.|.:||::||..||.|.|||||:|....|:|.||..||
Human 69 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLN 133
Fly 156 GFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPR 220
|..::.|.:|||||||...||:|.||||..|.:.:....|:::||.||.|:...||.|::||..|
Human 134 GLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 198
Fly 221 GVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQI 272
||.|:|::||.||:||||.||...|.|.::||.|:.|....:......::|:
Human 199 GVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQL 250
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
ssx | NP_569908.1 |
RRM_SF |
93..173 |
CDD:302621 |
45/79 (57%) |
RRM_SF |
179..257 |
CDD:302621 |
36/77 (47%) |
ELAVL2 | XP_011516080.2 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000313 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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