Protein Alignment ssx and rnp-1

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001256408.1
• Gene: rnp-1 / 179672
• WormBaseID: WBGene00004384
• Length: 305
• Species: Caenorhabditis elegans
• Alignment Length: 83
• Identity: 19/83 - (22%)
• Similarity: 36/83 - (43%)
• Gaps: 13/83 - (15%)

  Fly    93 TNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGF 157
            :.|.:..||.::...:|..:|.....:..|.|:::        |.||..: |.|.:..|.:|.|:
 Worm     3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKN--------YAFVHIE-EDDVDPIITRLTGY 58

  Fly   158 YVRNKRLKV----SYARP 171
            .:..|.:.:    |..||
 Worm    59 TIDGKVVNIKKSTSKLRP 76

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	19/83 (23%)
		RRM_SF	179..257	CDD:302621
rnp-1	NP_001256408.1	RRM	<2..>83	CDD:223796	19/83 (23%)
		RRM1_2_CoAA_like	4..68	CDD:240789	16/72 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158726
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930