DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ssx and exc-7

DIOPT Version :9

Sequence 1:	NP_569908.1	Gene:	ssx / 31086	FlyBaseID:	FBgn0024987	Length:	485	Species:	Drosophila melanogaster
Sequence 2:	NP_496057.1	Gene:	exc-7 / 174506	WormBaseID:	WBGene00001368	Length:	456	Species:	Caenorhabditis elegans

Alignment Length:	218	Identity:	90/218 - (41%)
Similarity:	125/218 - (57%)	Gaps:	20/218 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLN 155
            |.||||||||||.||..|:.:||:..|.|.:||::||..||.|.|||||:|..|.|:..|:...|
Worm    40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFN 104

  Fly   156 GFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPR 220
            |..::||.:|||||||....||.:||||..:.:::....|:.||.|:|.|:...||.|.:||..:
Worm   105 GLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSK 169

  Fly   221 GVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVR-------------LAEEHGKAKAAQFMAQI 272
            ||.|||::|::||..|||.||.::|.|.|:.|.|:             |::.....:||..:..:
Worm   170 GVGFVRFDKKDEADVAIKTLNGSIPSGCSEQITVKFANNPASNNPKGLLSDLEAVQQAATTLVPL 234

  Fly   273 GGGNG-------GGGGGPPHMGP 288
            ....|       .||.||.|..|
Worm   235 STILGAPTLRATAGGIGPMHHAP 257

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	44/79 (56%)
ssx	NP_569908.1	RRM_SF	179..257	CDD:302621	33/90 (37%)
exc-7	NP_496057.1	ELAV_HUD_SF	39..455	CDD:273741	90/218 (41%)
		RRM1_Hu	41..118	CDD:241094	40/76 (53%)
		RRM2_Hu	128..206	CDD:241096	33/77 (43%)
		RRM3_Hu	373..449	CDD:240823
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	4.010