Protein Alignment ssx and Rbm14

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_596879.1
• Gene: Rbm14 / 170900
• RGDID: 620542
• Length: 669
• Species: Rattus norvegicus
• Alignment Length: 190
• Identity: 50/190 - (26%)
• Similarity: 83/190 - (43%)
• Gaps: 23/190 - (12%)

  Fly   103 DMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVR-NKRLKV 166
            |.|..||..||:..|.:.:|.:|:.|        .||..:..:.:..||:.|:|..:| .:.|.|
  Rat    12 DTTPEELAALFAPYGTVMSCAVMKQF--------AFVHMRENAGAVRAIEALHGHELRPGRALVV 68

  Fly   167 SYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKRE 231
            ..:||  :.:....::|.|:|.......|..:|...|.:::.::::|        .|||...|..
  Rat    69 EMSRP--RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEA 123

  Fly   232 EAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGG-GNGGGGGGPPHMGPGG 290
            :|:.||..||....:|  :.|.|.|:.: |:.|......|.|. ....|.|.....|.||
  Rat   124 DAKAAIAQLNGKEVKG--KRINVELSTK-GQKKGPALAIQSGDKTKKPGAGDTAFPGTGG 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	21/70 (30%)
		RRM_SF	179..257	CDD:302621	19/77 (25%)
Rbm14	NP_596879.1	RRM1_CoAA	1..71	CDD:410020	19/66 (29%)
		PABP-1234	<3..280	CDD:130689	50/190 (26%)
		RRM2_CoAA	79..146	CDD:410021	19/76 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910