Protein Alignment ssx and Elavl4

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: XP_006502856.1
• Gene: Elavl4 / 15572
• MGIID: 107427
• Length: 397
• Species: Mus musculus
• Alignment Length: 254
• Identity: 99/254 - (38%)
• Similarity: 135/254 - (53%)
• Gaps: 30/254 - (11%)

  Fly    44 QQENGDGGNGGDGQEHSGDEEQHHSQDNEGNDNSAGQQQQMQQVDRTSATNLIINYLPQDMTDRE 108
            |..||...|..:|             .:..|.|.....|.....| .|.||||:|||||:||..|
Mouse    28 QVSNGPTSNTSNG-------------PSSNNRNCPSPMQTGAATD-DSKTNLIVNYLPQNMTQEE 78

  Fly   109 LYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYARPGG 173
            ..:||...|.|.:||::||..||.|.|||||:|....|:|.||..|||..::.|.:|||||||..
Mouse    79 FRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 143

  Fly   174 QSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 238
            .||:|.||||..|.:.:....|:::||.||.|:...||.|::||..|||.|:|::||.||:||||
Mouse   144 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 208

  Fly   239 ALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPG----GPMH 293
            .||...|.|.::||.|:.|....:..:...::|:            :..|.    ||:|
Mouse   209 GLNGQKPSGATEPITVKFANNPSQKSSQALLSQL------------YQSPNRRYPGPLH 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	44/79 (56%)
		RRM_SF	179..257	CDD:302621	36/77 (47%)
Elavl4	XP_006502856.1	ELAV_HUD_SF	60..396	CDD:273741	90/208 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910