Sequence 1: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_006796.1 | Gene: | HNRNPA0 / 10949 | HGNCID: | 5030 | Length: | 305 | Species: | Homo sapiens |
Alignment Length: | 375 | Identity: | 79/375 - (21%) |
---|---|---|---|
Similarity: | 120/375 - (32%) | Gaps: | 122/375 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAI 151
Fly 152 ----QKLNGFYVRNKRL--KVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNI 210
Fly 211 LRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGG 275
Fly 276 NGGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPN 340
Fly 341 NHNNNHPNNHHHNNNNNNHHNMGGPHPHHMQQMHPMGMNMGMGVNMGMGMGMGMPIHGGGGGG-- 403
Fly 404 ----------------------------GGGGGGGG---GGNFHHMAHRG 422 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 21/85 (25%) |
RRM_SF | 179..257 | CDD:302621 | 20/77 (26%) | ||
HNRNPA0 | NP_006796.1 | RRM1_hnRNPA0 | 5..83 | CDD:240772 | 18/77 (23%) |
RRM2_hnRNPA0 | 99..178 | CDD:241023 | 22/90 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 174..214 | 10/88 (11%) | |||
HnRNPA1 | 255..>269 | CDD:314495 | 0/13 (0%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 262..305 | 12/31 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |