DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment png and nek3

DIOPT Version :10

Sequence 1:NP_477492.1 Gene:png / 31084 FlyBaseID:FBgn0000826 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_001005692.1 Gene:nek3 / 448198 XenbaseID:XB-GENE-973192 Length:494 Species:Xenopus tropicalis


Alignment Length:230 Identity:78/230 - (33%)
Similarity:129/230 - (56%) Gaps:20/230 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VRVLGQGTFGRVFL-CHQNEVRGQPERKVCVKRIIVRNPKTELGL--IKEEVYIISQLRHPHIVE 72
            |||:|:|:|||..| ||::.     ..|..:|.|  |.||:...:  .::|..:::.::|.:||.
 Frog     7 VRVIGEGSFGRALLVCHKSS-----NHKYVMKEI--RLPKSFHAMEDSRKEAVLLANMKHSNIVT 64

  Fly    73 FLRSFSHAGTVNIVMEYVPNGTLRDVIQQLPSGTGGV-NQERLMGYFRDMVVGLEYLHIRCVIHR 136
            |..||...|.:.|||||...|   |::|::....|.: .::.::.:|..:.:.::|:|.:.|:||
 Frog    65 FQESFEGDGHLYIVMEYCQGG---DLLQKIKLQKGRLFTEQTILQWFVQICLAVQYIHEKRVLHR 126

  Fly   137 DIKPENMLLDANDRVKIADFGIANV-HAPSTQLQAGMGTPMYMAPEAMSSQGKVDFKSDVWSLGL 200
            |||.:|:.|..:..:|:.|||.|.: .:|:......:|||.|:.||...:. ..:.|||:||||.
 Frog   127 DIKSKNIFLTQSCNIKLGDFGSARILTSPAAYACTYVGTPYYVPPEIWENM-PYNNKSDIWSLGC 190

  Fly   201 VLYELCLGRSPFAAFLDKNATPALLHTVVQALVRP 235
            ||||||..:.||.|...||    |:..:.|...:|
 Frog   191 VLYELCTLKHPFQAGSWKN----LILKICQGSYKP 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pngNP_477492.1 S_TKc 11..271 CDD:214567 78/230 (34%)
nek3NP_001005692.1 Protein Kinases, catalytic domain 3..257 CDD:473864 78/230 (34%)

Return to query results.
Submit another query.