DRSC/TRiP Functional Genomics Resources

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Protein Alignment png and Nek3

DIOPT Version :10

Sequence 1:NP_477492.1 Gene:png / 31084 FlyBaseID:FBgn0000826 Length:291 Species:Drosophila melanogaster
Sequence 2:XP_006253421.1 Gene:Nek3 / 306576 RGDID:1307419 Length:471 Species:Rattus norvegicus


Alignment Length:252 Identity:80/252 - (31%)
Similarity:137/252 - (54%) Gaps:28/252 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VRVLGQGTFGRVFLCHQNEVRGQPERKVCVKRIIVRNPKTELGLIKEEVYIISQLRHPHIVEFLR 75
            :||:|.|:||.|.|..:.    ...:...:|.|.:....:::...::|..::::::||:||.|..
  Rat     7 LRVIGHGSFGSVLLATEK----SSNQTFAMKEIRLLKSFSDVQNCRKEAVLLAKMKHPNIVAFKE 67

  Fly    76 SFSHAGTVNIVMEYVPNGTLRDVIQQLPSGTGGV-NQERLMGYFRDMVVGLEYLHIRCVIHRDIK 139
            ||...|.:.|||||...|   |:.|::....|.: .::.::.:|..:.:|:.::|.|.|:|||||
  Rat    68 SFEAEGHLYIVMEYCDGG---DLTQRIKQQKGKLFPEDTVLNWFIQICLGVNHIHKRRVLHRDIK 129

  Fly   140 PENMLLDANDRVKIADFGIAN-VHAPSTQLQAGMGTPMYMAPEAMSSQGKVDFKSDVWSLGLVLY 203
            .:|:.|..:.:||:.|||.|. :.:|....:..:|||.|:.||...:. ..:.|||:||||.:||
  Rat   130 SKNVFLTHDGKVKLGDFGSARLLSSPMAFARTYVGTPYYVPPEIWENL-PYNNKSDIWSLGCILY 193

  Fly   204 ELCLGRSPFAAFLDKN-----------ATPALLHTVVQALVRPRLDCQLIRRLYDPV 249
            |||..:.||.|...||           ..|||..:.:|.||:     |:::|  :||
  Rat   194 ELCALKHPFQANSWKNLILKICQGPIHPLPALYSSKLQCLVK-----QMLKR--NPV 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pngNP_477492.1 S_TKc 11..271 CDD:214567 80/252 (32%)
Nek3XP_006253421.1 Protein Kinases, catalytic domain 3..257 CDD:473864 80/252 (32%)

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