DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12773 and VHC1

DIOPT Version :10

Sequence 1:NP_569905.1 Gene:CG12773 / 31082 FlyBaseID:FBgn0024365 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_009794.3 Gene:VHC1 / 852537 SGDID:S000000439 Length:1120 Species:Saccharomyces cerevisiae


Alignment Length:592 Identity:140/592 - (23%)
Similarity:240/592 - (40%) Gaps:153/592 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GTWDGVFTSCLINVFGVIVFLRSGWIVAQAGILNAVLIIFCTVVIALVSVLSAIGICERCRVESG 157
            ||:||||....:||..:::|||.|:|:.|.||:..:.::..:..|.|::.||...|.....|..|
Yeast    64 GTYDGVFVPTALNVLSILMFLRFGFILGQLGIICTIGLLLLSYTINLLTTLSISAISTNGTVRGG 128

  Fly   158 GVYFLIAHTLGSRFGGALGLLYCFGQAVGCALNVMGFGESMAGLVG--LEGSKWAIRG------- 213
            |.|::|:.:||..|||::||::..||.....:|.:|..|.:...:|  .:|...|..|       
Yeast   129 GAYYMISRSLGPEFGGSIGLVFFLGQVFNAGMNAVGIIEPLLYNLGYSAQGEPPAALGELLPRGH 193

  Fly   214 ---FATAAVLLLGCINVA--GVKWVIKLQFILLMILLIS----ALDFMVGSFTSEASGGFNGWAS 269
               |..|.|:|..|.:||  |.:.|.:...||.::|..|    .|..::.|..:|....:.|.:.
Yeast   194 WHEFTYATVILFLCFSVAFVGSQTVSRAGNILFLVLAASIFSIPLSALIRSPFTEGGISYTGPSW 258

  Fly   270 GNFVENLWPKYDDG---------YSWFRVFGVFFPTVTGVLSGINMSGDLRAPSTDIPNGTLAAF 325
            ..|.:||.|....|         .::..:||||||...|:.:|..||.:||.||..||.|||...
Yeast   259 QTFHDNLLPHLTKGAAGSLLKGKETFNDLFGVFFPATAGIFAGAGMSSELRKPSKSIPKGTLWGL 323

  Fly   326 GTSTFLYLVFVLFLGATCQRSFLYTDYMISVKVSAVHFLLLAGIYVSSMSSCLGAMYGTPRVLQS 390
            ..:...|.|.|..:|.:..|..||.:..|...:|:|.:::..|...:|:.|.:..|.|...||::
Yeast   324 LFTFICYAVVVFSMGCSIPRRSLYDEVQIIQTISSVQWVIFMGEMATSLFSIIVGMLGAAYVLEA 388

  Fly   391 IAKESVIPGIDILGKGRGPNKVPLYAMAIVALVTVTFIIVGDINFLAPIVTMPFLLTYACIDYAY 455
            |||:::|||::|....      |||::....::| ...:..|:|.:|..:||.||:|:..::.|.
Yeast   389 IAKDNIIPGLEIFAHS------PLYSLIFTWILT-QLCLFSDVNKIATFITMTFLMTFVVMNLAC 446

  Fly   456 FALAQTFDIQEQREERFRIQASSPSYETRRYGSVSDTGNDLDLLFPDRVRHKNLQSPQNSPLHQT 520
            |.|.               .:|:|::                                       
Yeast   447 FLLG---------------ISSAPNF--------------------------------------- 457

  Fly   521 VPLEFDNEGPSTSNQAQSSERRTGHEADTTLAVEQAVAQAGVEQDQGDEAEPIAPIRPPIHSKTK 585
                                                                    ||...    
Yeast   458 --------------------------------------------------------RPSFK---- 462

  Fly   586 NWYSGYCNRWASLLGAFTKLLVMLLVNWYYALTCFLVVFVVWFYVGTANPAVKPGLTAEFNFFAW 650
                 |.||:.:.:||...::.||:|:...|...||.:.:::.::...:|....|..::...:..
Yeast   463 -----YFNRYTTAIGALLSVVAMLIVDGISASVLFLAMILLFLFIHYFSPPKSWGDVSQSLIYHQ 522

  Fly   651 LKSVIFR 657
            ::..:.|
Yeast   523 VRKYLLR 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12773NP_569905.1 AA_permease_2 88..>456 CDD:459263 120/389 (31%)
VHC1NP_009794.3 AA_permease_2 45..824 CDD:459263 140/592 (24%)

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